Ciona intestinalis (yellow sea squirt): 100179569
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Entry
100179569 CDS
T01056
Name
(RefSeq) TBC1 domain family member 25-like
KO
K24799
TBC1 domain family member 25
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179569
Membrane trafficking [BR:
cin04131
]
Others
Specific organelles associated proteins
Auto phagosome
100179569
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
100179569
NCBI-ProteinID:
XP_002131277
Ensembl:
ENSCING00000008846
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Position
4:complement(4457615..4463490)
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AA seq
596 aa
AA seq
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MFPITRSSNVKDVIHVKVKKYAGYFNPESKSFAVDPHLTTFDDLQNILIQAFSLNGPFHI
TYLCRDDVGENVYLSMLTDWDLDAAFMTSSDPFLRLKLDAEPYKDGLMSKLSDWEKSESP
NNLQSSIVKHFIQPMTNSVNTILSLQNTQRSWSNSLGFAFNKLTVGLGYNPNIEEDEIFF
PSKPPLDDVEFRTYLDENGVLVKPEDLRLRVYHGGVAPALRKVVWRMLLNIFPIHLTGKE
RIEYMKRKTSEYEQLRSKWQAQADLDRVKQLSNMVWKDVLRTDRTHPYYSGADDNPHTVA
LMNILTTYALTHPKVSYCQGMSDIVSPILVVMNNEAQAYICFCGAMTRIQENFSRDGLTM
STKFKHLAMLTAHYDIEFFNYLQLLGADTMFFCYRWLLLELKREFNFEDAITVLEVMWSS
LPPQPPENDLSLHDEQIDARSFCDSNIAPGGTKSSPESSSSSFNSSESVDVPGEYVGVIE
YSTCPENVLRLRKPPISAKTSVGSPPKASDSFLDEETSNLPPPEDLGCGNPFLLFICLTL
LLEERDKVMSTECEYDDLVMHFDRLVRGHSPRKVLSKSMKLFAEYLRSESRHGMKT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctattacgaggtcaagcaatgtaaaagatgtcatccatgttaaagttaagaaa
tacgccggttatttcaacccagaaagtaaaagttttgcagtggatccacatcttacaact
tttgatgatttacaaaatattttaattcaagctttttcattaaatggaccatttcatata
acatatctgtgtcgggatgatgtgggtgaaaatgtttatttatcgatgcttacggattgg
gatttagacgctgcttttatgacatcatcggatccatttcttagactaaaacttgacgca
gaaccttataaagatggtttgatgtcaaaactatccgactgggagaaatctgagtcacca
aacaacttgcaatcaagtattgtgaagcattttatacaacccatgactaacagtgtaaac
accatactctccctacaaaacacacaacgttcttggtcaaattcactcggttttgctttc
aataaactcacagtaggtttgggttacaacccaaatatcgaagaagatgaaattttcttt
ccctcaaaacccccactggatgatgttgagtttcggacgtacttggatgaaaacggggtc
ttggtaaaaccggaagatcttcgtcttcgtgtttatcacggaggagttgctcctgctctt
cggaaggtagtttggaggatgttgctcaacatcttccccattcatcttacagggaaggag
aggattgaatacatgaagaggaaaacaagtgaatatgaacaactgagatcaaaatggcaa
gcacaagctgatcttgatagagttaaacaattatctaacatggtatggaaggatgtgcta
aggacagacaggacacacccttactatagtggagcggatgacaatccccacacagtggca
ttaatgaacattctcacaacttatgctctaactcatcccaaagtatcttactgccaagga
atgagtgatattgtatctcccatactagttgtaatgaacaacgaagcacaagcttatatt
tgtttctgtggagccatgacaagaatccaggaaaacttctcaagagatgggcttacaatg
tcaaccaagttcaagcacttggcaatgcttacagctcactacgacattgagttcttcaac
taccttcaattacttggggctgatacaatgttcttttgttatcgatggttattacttgag
ttgaaacgagaatttaactttgaagatgcaataactgtgttagaggtgatgtggagttca
ttgcctccacaacctccagagaacgatctttctctccatgatgaacagatcgatgctcgg
agtttctgtgactccaacatcgctcctggaggaacaaaatcctccccagaaagctcctcc
tcttcttttaactcctccgagagcgtggatgtacctggagaatatgtgggagtgattgaa
tactccacatgcccggagaatgttcttcgtcttcgaaaacctcccatcagtgctaagacc
tctgttggaagtcctccaaaagcatcagattcgttcctagatgaagagacgagcaatctc
ccgcctcctgaagatcttggatgcgggaatcctttcctcctgttcatatgtctcactctg
ctcctggaggagcgtgataaagtgatgagcacagagtgcgagtatgatgatctcgtgatg
cattttgatcgcctcgtacgaggacacagtccacgcaaagtcctttctaaatcaatgaag
ctttttgccgagtatttacgctccgaatcacgacatggcatgaaaacatga
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integrated database retrieval system
