Ciona intestinalis (yellow sea squirt): 100179576
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Entry
100179576 CDS
T01056
Name
(RefSeq) polynucleotide 5'-hydroxyl-kinase NOL9-like
KO
K06947
polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100179576
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-60S particles
Kinases
100179576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Cupin_NOL9
ATPase_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
100179576
NCBI-ProteinID:
XP_002123550
Ensembl:
ENSCING00000011450
LinkDB
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Position
2:complement(3719042..3725028)
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AA seq
661 aa
AA seq
DB search
MAGAKKSTSKKDLKTKLSNKIRKTTKKMKDSKLCKSMKSKRMKLKEEISTENKETKEEIT
FCSSSCDNSQSQEDELMPSPYKKYKLEQMSRMLESVNICPLLPDDCELFPIKKNNESALL
AMKSTSSGVKLHGCAKVSVICGLCVINGFTLSVENSPQVIMAPLTHVATTVRPIAVETKQ
CRKDIYKKYKTAVSNIKDTLDKYEVILLFQSTSIQTLSYPGYPDIFTPSITEVKDFRVLC
KQCFLCSTSRYFIEHNSYTEAVNSLRSHDNNTQSYPVIVTAGGKNVGKSTFNRYLVNRLL
SDHKHVYYLDCDIGQSEFTPSGFISVTRIEQNQPLLSPTFTNEVKPMLMCYYGHNTPSGD
PDFYSSCVQFVLQSLFEVLNGNLDGPLVVNTMGWIRALGLQLLIDTIRMVNPTHIMQFQT
AKDSRNLAPMTKEFVSSMTGWLTPQSHACHELVTIATSITPLEIIKYMAPDYRNLAMLSK
LSQIADACVNRDSSINQKLTRQTLLGKLQSAQPFKISLKHLQVYNATDSQVKYKHVLAAL
NASVVALCISPESKQDLMKIGNEDFIPPAQPCTCIGLGLVRGVEPDNGFIYIVSDLNLQQ
LQEVNCIIRGNSSIPEPLLLEQEKEATKDSPYVTNNFPYETVGSGMFRVHRKFSKLTNDG
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcaaagaagtccacctcaaagaaggacttaaaaaccaagctatcgaataaa
attagaaaaaccacgaagaaaatgaaagattcaaaactttgcaagagcatgaagtcaaaa
agaatgaagttaaaggaggaaatctcaacagaaaataaggagacgaaagaagaaattaca
ttttgcagcagttcttgtgataattctcaatctcaagaagatgaactaatgccgtcccct
tacaagaaatataaactggagcaaatgagtcgaatgttggagtcggtcaatatttgtcct
ctacttccggacgactgtgaattattccctataaagaaaaataatgaatcggccttgctt
gccatgaaaagcacttcaagtggcgtcaaacttcatggttgtgcaaaagtgtctgtaatt
tgtggcttgtgcgtaattaacgggttcactcttagtgttgagaactccccacaagtgata
atggcccctcttacacatgtagcaacaactgtgcgtcctatcgctgttgaaacaaagcaa
tgcagaaaggatatttataaaaagtacaaaacagcagtttcgaatattaaagacacctta
gacaaatatgaagttattctgttgttccaatcaacctcaatccaaacactcagctatcct
ggctatccagatatttttactccatcaataactgaagtgaaggactttagggtgttatgc
aaacaatgtttcttatgttcaacatccagatatttcattgaacacaattcttatacggaa
gctgttaattcactacgaagtcatgacaacaatacccaatcatatcctgtaattgtaact
gctggtggtaaaaatgttggaaaatcaacatttaacagatatcttgttaatcgtctacta
agcgaccacaaacatgtttattacttggattgtgacatcggacaaagtgaattcacacca
tctggtttcatatccgttacacgcattgaacaaaaccaacctttacttagccctactttc
acaaatgaagtcaaaccaatgctgatgtgttattacggtcacaacacaccttctggagat
cctgacttctactcatcatgtgtgcagtttgtgctgcaatcattatttgaagtattgaat
ggaaatcttgacgggccgcttgtggtgaatactatgggttggatacgagctctcggactt
caacttttaattgacacgataagaatggtgaacccaacacacatcatgcagtttcaaact
gccaaagactctcggaaccttgctccaatgacgaaagagtttgtatcttctatgactggg
tggctgactccacaaagccacgcttgtcatgagttggttaccatagcaacatcaatcacg
ccactcgaaataataaagtacatggcaccagactaccgcaacctggctatgttgtccaag
ttatcacaaatcgcggatgcttgtgttaatagagactcttcaataaatcagaaattgacc
aggcaaactcttcttgggaaactacaaagtgctcaacctttcaaaatctcattgaaacat
ttacaagtgtataatgctacagatagtcaagttaaatacaaacatgtcttggctgctttg
aatgcttctgtagtggcattatgtatatcccctgaaagtaaacaggatctaatgaagatt
ggtaatgaagatttcatcccacctgctcaaccatgtacttgtattggtttggggttggta
agaggtgtggagccagataatgggttcatttacattgtttccgacctcaatctacaacaa
ctgcaggaagtgaattgtataatacgtggaaattcatcaataccagaacctttactgctg
gaacaagagaaggaggccactaaagattcaccatatgtgacgaacaacttcccatatgaa
acggttggttcaggaatgttcagagtacacaggaagttttctaagttaacaaatgatggg
aaataa
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