Ciona intestinalis (yellow sea squirt): 100179598
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Entry
100179598 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100179598
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100179598
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100179598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_13
zf-C3HC4_3
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100179598
NCBI-ProteinID:
XP_002131152
LinkDB
All DBs
Position
5:complement(4749553..4751866)
Genome browser
AA seq
685 aa
AA seq
DB search
MNKHPRTRTMSTGNDCVVCAHPIDVYAVGHCDHVICFKCSTKMRLLCKEKYCPVCRKELK
KVIFSSNKNNFVNLNAKRLIKETRYNLNVFFTDAATETKFIKLLEHQCQICPNRPPDTNF
QNLKSHIRKEHGMYHCEICLEHNRNFTSEYKVYSRKDLATHKRVGDANDRSHKGHPLCKF
CDERYLDDDKLFHHLRTEHFYCHLCEHLHSNDFYDNYIELRKHFKSDHFLCEIANCKNEE
FTSVFSSEIDLKAHCAVAHKDMKSKQQQKQDRQINLGFQYTRRPPPASRGRRPHNPHRSA
AAFEDSNDMELAAAMSLSMKDVAPAPTEPDAPVTKDQKPPVKQEPAQPSLSNLIESNQFP
GLGDTASAAPPKPIPAVLREKKPEAAAAPLWTPKSNYPLQSNSTNDFPALSQPTTKPKPF
LQPQAVAKKPTKQKQPPQSAPNLNSRQNTNSASLKSEDDFPSFSKPKQPLQKGPNWKSRQ
NVNSTILKSEEDFPSLGGTAKPVAPWKTQQNSVIKKTYIKPVAVHNKTSTVNANKKKPIS
SEVRQKNRSVVGYAGNSNEEYSDSFVTTSQNFHRSDKSSLTRMVQDTSLLDEPAHYELGS
NITVTKQQPVSKPAMKQKAFTKEEQDFPALYASGEIHWAHAEPVYRHNIPSHYTYNDHYP
SNSHTDQQQNGTDLKLSNIFDFPSL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcatcctcgaacaagaacaatgtcgacaggcaacgactgtgtagtatgtgcc
caccctattgacgtgtatgctgttggacactgtgaccatgttatctgctttaagtgttca
acaaagatgagattgctctgtaaagagaaatattgtcctgtttgccgaaaagagttaaaa
aaggtgatattctcgtccaacaaaaataattttgtcaacctcaatgctaaaaggctaatt
aaagagactcgttacaatttgaatgtattttttactgatgctgctacggagacaaagttt
ataaaactgctggaacatcagtgccaaatttgccctaatagacctcccgatactaacttt
cagaacctaaaatctcacatacgtaaagagcatggcatgtaccattgcgaaatttgtcta
gagcataaccgaaattttactagtgagtataaagtgtacagtaggaaagacctggccaca
cacaagcgcgttggggacgcaaatgaccgctcccacaaaggccacccactatgtaagttt
tgtgacgaacgttaccttgatgatgataaattgtttcaccatctgcgtacggagcatttc
tactgtcacttgtgtgagcaccttcactcaaatgatttctatgacaactatatagaatta
cggaagcattttaaaagcgaccatttcctatgtgaaatagcaaactgtaaaaatgaagaa
tttacatcagttttctcatctgagattgacctaaaagcacactgtgctgtggctcataaa
gatatgaagtctaaacaacaacaaaaacaagaccggcagattaatttaggttttcaatac
acaaggagacccccacctgcctcaagaggaagaaggccacacaatcctcatcgatcagct
gctgcatttgaggattcaaatgacatggaactagcagcagccatgtcactgtctatgaag
gatgtagccccagcacctacagagccagatgctccggttacaaaagatcaaaagccacct
gtaaagcaagagccagcgcagccatctctttcaaacctcatagaatctaaccagtttcca
ggtttaggtgacacagcttcagctgcaccaccaaaaccaatcccggctgttttaagggaa
aagaaaccagaagctgctgcagctccactttggacacccaagtcaaactacccattacaa
agcaatagtactaatgactttcctgctctaagtcaaccaactactaaacctaaaccattc
cttcagccccaagccgttgcaaagaagcctacaaaacaaaaacagccacctcaaagtgcg
cccaacttaaattcaagacaaaatacgaactctgctagtttaaaaagtgaagacgatttt
ccctctttttcaaaaccaaaacagccacttcaaaaaggtccaaactggaaatcccgacaa
aatgtgaactctacgatcttaaaaagtgaagaggactttccttctttaggaggaactgct
aaaccagttgcaccatggaaaacccagcaaaattcagtcattaaaaaaacatacataaaa
ccagtggctgttcataacaaaacctctactgttaatgccaataaaaagaaaccaatatct
tcggaagtaagacagaaaaatcgttctgtagttggctatgcaggaaattctaatgaagaa
tactccgatagttttgtaacaacgtcgcaaaacttccatcgctctgacaaatcaagttta
actagaatggtgcaagatacttcgctattagatgaaccggcacattacgaactgggctca
aatataacagtcactaaacagcagccagtaagtaagccagctatgaagcaaaaggcattt
acaaaggaggaacaagacttcccagctttgtatgcaagtggggaaatacactgggcacat
gcggagcctgtttaccgacataacataccttctcattatacttacaatgaccactaccca
tctaattcacatacagaccagcaacaaaatggaacggatttaaaattgtcgaacattttt
gatttcccttcattataa
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