Ciona intestinalis (yellow sea squirt): 100179624
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Entry
100179624 CDS
T01056
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00310
Lysine degradation
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100179624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100179624
Enzymes [BR:
cin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100179624
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
100179624
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100179624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
DUF3336
TPR_12
Motif
Other DBs
NCBI-GeneID:
100179624
NCBI-ProteinID:
XP_002128556
Ensembl:
ENSCING00000006541
UniProt:
F6RQ08
LinkDB
All DBs
Position
9:5813443..5815226
Genome browser
AA seq
430 aa
AA seq
DB search
MDVNVELFTSEKSGRGLKAKRNLNPGSTVLSSEPYAYLLSKKQKGVYCDFCFKKQDGLLQ
CSGCKYMKYCNRNCQKMAWNEHHKAECPALKNVMPKRPPDFVILLGRLLWNMQQYSSAKL
PEKNSILDLESNYNKLSQNQKEALMNFLVILHTFWSPKPLPPQVTDNKMLLELCARIKNN
SFAICNEELQSDVGTGVYLNCSFINHSCEPNCVAEFNMRTLKIRAVKNITAGEEVLISYV
DLFATSFERQRELMSIYHFQCTCHSCNAKTDDDQMMQDFDGKITESKLSSVKDMLSQMEE
LRKQCDYQKIKDLVEGCVKRKILPHENIYMAKVLDFGMDACIELGVLTQAFEFGSMALFS
YKLYLHANHPMLGIQLMKLGKILLHEEKNQDAMQFLREAFKILTITHSPNSSVLTELQNL
LGQCLAEMQN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaatgtggaacttttcacttctgaaaagagcggacgcggtctaaaagcaaag
cgtaatttaaacccaggttctactgttctttcatccgagccatatgcatatttgctatcg
aaaaagcaaaaaggcgtttattgcgatttttgtttcaaaaagcaagatggtctgttgcaa
tgttctggatgcaaatatatgaaatactgcaacagaaactgccagaaaatggcctggaat
gaacaccacaaagcagagtgccccgcactgaaaaacgtaatgccaaaaagaccaccagat
tttgtcattttacttggaaggttgctatggaatatgcagcagtacagcagtgccaaatta
ccagagaaaaattcgattttggatttagagtcaaattataataaattgtcgcaaaaccaa
aaagaggccttgatgaatttccttgttattttacatacattttggagcccaaaacctctt
ccacctcaagttaccgataacaaaatgctgttggaattatgtgctagaattaaaaataac
agttttgctatatgcaatgaagagctgcagtcggatgttggcactggcgtgtatctcaat
tgcagcttcataaaccatagttgtgagccaaattgtgttgcagagtttaacatgcggaca
ttgaaaataagggcagtgaaaaatataactgcgggggaagaagtcctgataagttatgtc
gatttgtttgctactagctttgaaagacaacgagaactaatgagtatttaccattttcaa
tgcacttgtcattcttgcaatgctaaaactgatgatgatcaaatgatgcaggactttgat
ggaaaaataacagaatcaaaactatcttctgtaaaagacatgttgagtcaaatggaggag
ttaagaaaacaatgtgattatcagaaaataaaagaccttgtggagggttgtgtaaaaagg
aaaatactgccacatgagaatatatacatggcaaaagttttggattttggcatggatgct
tgcattgaactaggtgttttgacacaggcatttgagtttggttccatggctttatttagc
tacaaattatatttacatgcaaaccatcctatgctgggcatacaacttatgaaactcgga
aaaattttactccatgaggaaaaaaatcaagacgctatgcaatttttgcgtgaagcattt
aaaattctcactataacacattcgccaaacagctctgttttaacggagctacaaaattta
ctgggccaatgtttagcagaaatgcaaaactaa
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