Ciona intestinalis (yellow sea squirt): 100179630
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Entry
100179630 CDS
T01056
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179630
Membrane trafficking [BR:
cin04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100179630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
Motif
Other DBs
NCBI-GeneID:
100179630
NCBI-ProteinID:
XP_018671968
LinkDB
All DBs
Position
Unknown
AA seq
2184 aa
AA seq
DB search
MGDYEKIAEYFVIAGLTESSLPLDEDLAFPNAQHKLSDQRKDPITDICVIDRTLEETCPQ
DFTCIELTPTGFPADLNHGSLTAHNIFLCYRRGKDKPPLIDLGVYYEGLETVRSGISILE
TTPAGRSGNVNNKSGMGSHPIYLTYRRAKETAPQNALAVTDICIILSNKAEKAPYAFCQI
EKNLNKGIIGSNVFLCYKKSMRQVDSIAFKAGFIGRYPADDSASFLLPDSVPLFCLPMGA
TIECWSSKTRHPLPTFSSFVLTTETSDKVFGAVVSFYESYPEEKLTDDQKYKLGILRGDG
QRSKTPRTIHTNKAICLLSRWPMFSAFRDFLMYLYRMTVSPIAHQVPVERHIAHFMHNVP
FPTSQRPRVQYQMSPMHTTIITRPQITPIPLSGASFLALLDDLGPENTLTLLVLALTEHK
IVIHSLRPAEITCVAEALITLLFPFKWQCTYVPLCPLEMGYVMEAPCPFIVGVDSRYFDI
YEPPSDVACVNLDTNSITMMEEKKSISWKLLPKKPAKLLKSTLQKYFKEVKECPREDSNG
GTMMSLQDPDISRTERHRKIDLAIQEAVLKLTTSMMKGYRQFLLPITEAPNSGTTDPSSL
FNIQEFVRSRERSSQRFFNSLVGTQLFSSFIEERCLTSSTGMSDGISGRSGSLVFFDECI
DRLTPDHDHVHLIETDSQISDHTVMIMPPDEKGLPPGVGYQYTTFPDLTDELFILNDEDA
GMNNDGSTRSRRKSETFTFGHRTKQELRTMQKLSKFHSGDPQLWARLLMSHTYGAWFACL
PAFVIECRHKSAALRTAHDALHSLKDKNCIPLPDETYYRMLLHLCSVYNKPALAVRVFQF
VRKTGIQLSAITYGLYNKAVLEGTWPSSNRDGYMLWLKLRNVFLATRKFRYGLRRYSKMA
GSDASSDLDSTSHASVESNHTMSHPPPVPDVRVEEPDHPPQKTQEVRLQSITNEEDCKST
AYLGGQSDHGYNSMPKEQIRRGSPHKGLKVTQSVKATLTEEQPQIQDQKPPVSPSISLHN
SNNMGRSVKPPNTLDIPGPHGDRIIEQHTDPGLRSDETLVNGEAGDPMAVLHMGNKSASG
EVIGHRPRSIPVSPALHRKPGHSSFMFKSIGSTGSTGGASGDSNTACQDKQPTNNPNENL
SSNKTNVMHGSNGSKSTECSVQLTTNQLSPINNQSNKGLPLTPGLSGQVADDVFEGKETS
DEDVHKTQVSKTSPKLVNGAAKTPGASPATPELTNLFGGDAKFLSSLSDSDQLRYQELCS
HRSPSINESSDLPRSPRYASLSTSRTSRGRASTSLFPGGSNAGGISPLIGQKFLLENKQF
AANRSNFDNLTADDIMSPGNSPSHTGKTSSILARKNRSPSRLIASSPSPRKRSQTTRVIG
SNSLVVVDGVAMLTSTPLRPVVETTAPTDPLSATDSSNAGNPTSLTRKTSAPNLNKQRVE
RQDISHLATDPLSPYSKGTSPEVVESVPVPGISMSRSTNSLSRHLVDEIEDYLKRDELVR
CSSDATLIAHQMERVEKIKNEINALPEVLNEDGESSPNTQRKNENMGLVRSNTFHNDQST
PSNTWFSSGSKFNSLLKATTVGMATKAKKVASNLAKDLNETMQASLAYYTPEKIKGSLTD
LTGNSQEDIRPSNEEPSAKRNLEAKGFDLYSSQSSLRSSDSLHSAIDSKPGDRVKRRPGG
KHRPQKLERPLSMPQFDSGSGNIPPLASSYLSIPGVNSTDPNITSSMTSLNNKGTSDVEV
TISSCSKCHKCGSLVYDEEIMAGWIADESSLNTHCPFCNSLFVPFLNIEIKDFRQSESNK
FHASNFLSTSHEKISDSTNKTTESLSPVAEGYAGSFVLPLTPDATIQSPDLQQNQAADKS
CVEQSEQKPQLMPTPPNTPLLIDIGTTDTQTTPTTPTNSNFNSLPKDLNPTPSSSDNPPH
SPLSNKSSATESSQESHSAGMSLGDSQSELNGPSVSQILEPVTVPYLSSLVLRKELENLL
ENEGTKVLLEPGFVDHHPIIYWNLVWCFRRLNLHSNLYKILLRSQLLQQNSKVPPNKKDN
VVIHLMWDNLKLHLDGDKPPLYCAWHQIMTNGPSEEYQSYSQSFLSDIKESIMQDDVLGP
LVAVLNELNVQRGIRRSAYREILYFIIVALGKASIDTIAFDREYRRAFELLSPAERALTH
KCDRPPNDHAIDCREIFGELDLYK
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgggagattatgaaaagatagctgaatattttgtgattgctggactcacagagagttct
ctgcctttggatgaagatttagcttttccgaatgcgcaacacaaattaagtgatcagcga
aaagatccaattacagatatttgtgtgattgacagaacacttgaagaaacttgcccacaa
gacttcacctgcattgaattgacaccaactggatttccagctgatttaaaccatggaagt
cttaccgcccacaatatatttttatgttacagaaggggaaaggacaaaccacctttaata
gacctaggggtttactatgagggtttggaaacagtaagatctggtatttctattctggaa
acaactcctgctggcagatcaggaaatgttaacaataaaagtggcatgggaagtcatcct
atttatctgacctacagaagagcaaaggaaactgcgccacaaaacgctcttgctgtcaca
gatatttgtatcattctgtcaaataaagctgaaaaggcaccttacgccttttgtcaaata
gagaaaaatctaaacaaaggaattatcgggtcaaatgttttcctttgttataaaaagtca
atgagacaagtggattccatagcatttaaagcaggtttcatcggccggtaccctgctgat
gattctgcctcatttttactccctgattctgtccctttattctgcttacccatgggtgca
acaatagaatgttggtcaagtaaaacgcgacacccacttccaactttctcatcatttgtc
ctcacaaccgaaacatcagataaggtgtttggagctgttgtatcattctatgagagttat
cctgaagaaaaactcacagacgatcagaaatataagcttggtatcttacgtggggacgga
caaaggtctaaaaccccaagaaccatccacaccaacaaagctatctgcttgttatcaaga
tggcccatgttttctgcatttcgagacttcctaatgtatctttatcgtatgactgtatca
cccattgcccatcaagtaccagtggaaagacacatagcacacttcatgcacaatgtgcct
ttcccaacctctcaaagaccaagagtacaataccagatgtctcctatgcacacaacaata
atcacaagaccacagataacaccaattccattaagtggagcatctttcctcgctcttctg
gacgatttgggtccagagaacaccctaacgcttctcgttctcgcactcactgagcataag
attgtcattcattcactaagacctgcagaaattacttgtgtagcagaagcattgattact
ttattgtttccattcaaatggcaatgtacgtacgtcccactttgccccctggagatggga
tatgtaatggaggctccatgtccattcatagtaggggtggattcaagatattttgacatc
tatgaaccaccatctgatgttgcttgtgtgaacttggacacaaatagcattacaatgatg
gaggaaaagaagagcattagttggaagcttcttccaaagaaaccagccaagctccttaaa
tcaactcttcaaaaatactttaaggaggtaaaggagtgcccacgggaggattcaaatgga
gggacgatgatgtcgcttcaagatcctgatatttcaaggacagagcgccaccgaaagata
gaccttgcgatacaagaagccgtattgaaactcactacatcgatgatgaaaggttatcgc
cagtttctcctcccaattactgaggctcctaactctggtacaactgacccatcttcacta
tttaatatacaagaatttgttcgctcccgtgaaagatccagtcagcgcttcttcaattcc
ctcgttggaactcagctcttctcttctttcatcgaggagcgatgtttaacatcctccact
ggtatgtcggatgggatctcgggaagatcaggaagtctcgtcttctttgatgaatgtata
gatcgtctcacaccagaccatgatcacgtacatctcattgaaacagattcacaaataagc
gaccatactgttatgatcatgccacctgatgaaaagggactcccacctggagtggggtac
caatacaccacatttcctgacctaacggatgagttgttcatccttaatgatgaagatgcg
gggatgaacaacgacggctccacacggagcaggaggaagtctgagaccttcacgtttgga
catcgaacaaagcaagaattaaggacaatgcaaaagttgtccaagttccacagcggtgat
ccccaactttgggccagattactaatgagccatacatatggtgcatggtttgcctgctta
cctgcttttgtcattgaatgtcgtcacaaatctgctgcattacgaactgcacatgatgcc
ctgcatagtctaaaggacaaaaactgcattcctttacctgatgaaacatactacaggatg
ctcctacacttatgttctgtatacaacaagccagctcttgctgtgagagtgtttcagttc
gtacgaaagactgggatccaattaagcgcgataacctatggactttataataaagctgtg
ttggaagggacatggccatcttctaatagggatgggtatatgctgtggttaaaactccga
aacgtatttcttgccacgaggaaattccgttacggtcttcgtcgttactccaagatggct
gggtcagatgccagctccgatctcgattctacgagccatgcgagcgtggagagcaaccac
acgatgtctcatcctcctcctgttccggatgttcgtgtggaggagccggatcatcctcca
cagaagacacaagaagtaagattacaatcgatcacaaatgaagaagattgtaaaagcacc
gcctacttaggtggacaaagtgaccacggatacaactcgatgcctaaagaacaaataaga
cgaggttctccacacaaaggattaaaagttacacaaagtgtaaaggcaacccttactgaa
gaacaaccacaaattcaagaccaaaagcctcctgtatccccctctatatccctccataac
tccaacaacatgggtagaagtgtgaagccacccaatacactagatatccctggaccccac
ggggataggattattgagcaacatactgatcccgggttaagaagcgatgaaactttagtg
aatggagaagcaggagaccccatggctgtgctgcatatggggaataaaagtgcatcagga
gaggtgatcggacaccgacctcgttctatcccagtgtccccagctctacatcgtaaacca
ggccacagcagcttcatgttcaagtcgattggaagcactggaagcactggtggtgcgtcc
ggtgactcaaacacagcatgccaagataaacaaccgactaacaaccctaatgaaaatctt
tcttctaacaaaactaacgttatgcatggcagcaatggtagtaaaagcacagaatgtagt
gtccaattaactactaatcaactttctccaatcaacaatcaatccaataaaggtcttcca
ttaacccctggtttgtctggtcaagttgccgatgatgttttcgaaggaaaagaaacttct
gatgaggacgtgcacaaaactcaagtttctaaaacctcaccgaaacttgtgaatggggca
gcgaaaacccctggtgcttcccctgctacaccagaactcacaaacctctttggaggagac
gctaagtttctctcgagcctcagtgattcggatcagctccgataccaagagctctgctcc
cacaggagtcccagcatcaatgagtcttctgatctcccaaggagtccaagatacgcctcc
ctttcaacatccaggacatcaagaggaagagcaagcacatctttgttcccaggtggtagc
aatgcagggggcattagcccacttatcgggcaaaagtttttgttggaaaacaaacagttt
gcggcaaaccgaagcaactttgataatttgacggctgacgatataatgtcaccgggtaat
tctccatctcatacagggaagacaagcagcatccttgcgaggaagaaccgatcaccgagt
cggttaattgcttcgtcaccatcgccacggaaacgatcacaaacaacgcgcgtcattggt
agtaactcactggttgtagtagatggtgtagcaatgcttacaagcactccgttgcgccct
gttgttgaaactacagctcctacagacccattgtccgccaccgattcgagcaacgctgga
aatccaacttcacttactcgtaaaacatctgctccaaaccttaacaaacaaagagtggag
agacaggacatcagccaccttgcaactgacccactgtcgccttactctaaaggaacttct
cctgaagttgtggaatctgtaccagtaccaggaatttctatgagtcgttccacaaacagt
ttaagtcgccacctcgttgatgaaattgaagactatttgaagcgagacgagctggttcga
tgttcctcggatgccactctcatcgctcatcagatggagagggtggaaaagataaagaat
gaaattaatgctttaccagaggtgttgaatgaagatggagaatcaagtccgaacactcag
cgtaaaaatgaaaatatgggtttagtcagatccaacactttccacaacgatcaatccacc
ccctctaatacttggttcagttcaggctcaaaattcaacagtttattgaaagccaccaca
gttggcatggcaaccaaagcaaagaaggtcgcctccaatctcgccaaggatctaaatgaa
actatgcaagcaagtctggcatactatacaccagaaaaaatcaaaggttcattaacagac
ttaactggtaattcccaagaagacatcagaccatcaaatgaagaaccatcagctaagcgg
aatcttgaggccaaaggatttgatctttacagcagtcaatcgagtctaaggagcagtgat
agcttacacagtgcaatagattcaaaaccgggtgatcgagtgaaacggcgacctggtggt
aaacatcgaccacagaaacttgaacgacctctcagtatgccacagtttgattctggaagt
ggaaacattcctcctcttgcgtcatcttatctttccatccccggcgtaaattcaaccgat
cccaacatcacgtcatccatgacttctttaaacaataaaggcacatcagatgttgaagta
acgatcagcagttgttcaaagtgccataaatgcggaagtcttgtttatgatgaagaaata
atggctgggtggattgctgatgaatcaagtctgaatactcattgtcctttctgtaactct
ctatttgtgccattccttaacattgagataaaggatttccggcagtccgagtccaacaaa
ttccacgcttcaaatttcctctcaacctcacatgagaagatatcggactctacaaataaa
accacagaatctctttcaccagttgctgaaggctatgccggttcatttgtcctccccctc
acaccagatgctacaatacagagcccggacttgcagcaaaatcaagctgctgataagtca
tgtgttgaacaatcagaacagaaaccacaactaatgcccacaccccccaacacaccacta
ctgattgatatcgggaccaccgacacccaaaccacccccactacaccaacaaacagtaat
tttaactcgttgccaaaggatttaaacccaactccatcatcaagtgataacccccctcat
tctccattatcaaacaaatcttccgctacagagtcatcacaggaaagccacagtgcaggg
atgagcctcggggacagccagtctgagttaaacgggccatctgtatctcagatacttgaa
ccagtgaccgttccctacctaagttcacttgttttgcgaaaagaattggaaaatctgctt
gaaaacgaaggaacaaaagtcttactggagcctggtttcgttgaccatcatcctattata
tattggaacttggtttggtgcttcaggcgattaaatcttcactcgaatctttacaagatt
ttacttcgatcgcaacttctgcaacaaaattcaaaggtcccccccaacaaaaaggacaat
gttgtcatacacctgatgtgggataaccttaaactacatttggatggagacaaaccacct
ttgtattgtgcctggcatcaaataatgacgaatggtccaagtgaagaatatcaatcgtac
tcccaatctttcctctccgatataaaggaaagcatcatgcaggatgatgtgttgggtcca
ttagttgcggtgctaaacgaactgaatgttcaacgtgggatccgcagaagtgcttatcgg
gaaattctctacttcattattgtagctcttgggaaagcttcaatcgacacaattgcattt
gaccgtgaatatcgtcgagcgttcgaacttctcagtcctgcagagcgtgccctcactcat
aaatgcgaccgtccaccaaatgatcacgcaattgactgccgtgaaatatttggtgaactc
gacctttataaataa
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integrated database retrieval system
