Ciona intestinalis (yellow sea squirt): 100179641
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Entry
100179641 CDS
T01056
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100179641
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100179641
Meiosis-specific proteins
Cohesin complex and associated proteins
100179641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
Flagellin_C
DUF3772
Motif
Other DBs
NCBI-GeneID:
100179641
NCBI-ProteinID:
XP_009860924
Ensembl:
ENSCING00000004299
ENSCING00000021040
ENSCING00000024865
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MNYLESIEVENFKSYRGKILIPFKKFTAIIGPNGSGKSNLMDAISFVLGEKTSSLRVKKL
SDLIHGAPIGRPISTRARVTATYCNSNGEKTEFTRIIKGTSAENRINDKVVTHAEYNKEM
EKINIFIKVKNFLVFQGQVESIAMKNPKERTQLFEEISGSGEFKEEYEKAKSEMSKAEQE
TQYSFHRKKGIAAERKEAKQEKDEADKYRKLRDDYSNLRLQLMLFKLFYNEKEIEAIRAE
ADTKNKDIRHHIRKREKYEEEIKRKKQEQGKMMRELSALERAIQEKETELNRKRPMYIKA
KENTNFVMKKVESAKKSLRTAENRHESHMHVIEDLQKQLQEIEERRKEFDGQVELESQTE
GRDLELEESQITEYNRLKEEAAKRSTALNTEIEKLQREQQTDQEKLDAERRKKSELWSQQ
KQKKKELEESKSRVDKLKDYIETSHTTLQEHKKLKVDLEKQVQSSFERIREINIELEEVM
KKQGDAKVDRTESSRQKRRLELLETLRRLFPGVYGRVLDLCEPIHNRYKIAITKVLGKYM
YAIVCDSEKTARDCIQYMKEQCAEPETFLPLDYIDAKPTNEQLRTIREPNGVKLVIDVIK
YDLPAIKKALQFTCGNSLVCESAEDARKVAFGQVQKHKDGFGGSDVQRRNQAVALDGTLF
QKSGVISGGATDLKRKAQRWDEKVLDILQSKKEKLTEELKQEMKKKRKEADLKNIISQIG
GLQNRIKYSQNDLDNTEKGNMKEHKEKIEELDRLLQGFEPRFMEIEERMRTREGEINCFR
ASMNEVEDQVFRNFCVLIGVPNIRVYEERELRRQQETLKKRLEFDNQKSRVTNQLEYENS
LDTNQNVEKWREMIKNDEANISHHKEEEKKAMKLIQETENALQEVKSKKIQKRRDCDEKT
TEIEDVRKDLGKLNKEMAQFQKVITSQELKIEQKREQKHSLLQQCKMEDISLPMKRGTMD
DIDESEHLSESSNALSQSTSAVYDKEAKLELDYRKLPSDLRNLELDEVKREGERLQSRMN
DLSSTIQRFVAPNMKALSHLDEVKRQYHESKDQFDSYRKRARKHRQDFEMVKKKRVEHFN
QCFDYVATKIDDIYKDLSRNNSAQAFLGPENTEEPYLEGITYNCVAPGKRFRPMDNLSGG
EKTVAALALIFAIHDYQPSPFFVLDEIDAALDNTNIGKVAEYIKQMSNRVQCIVISLKEE
FYNRVDALVGIYPQQIDGCISSRVISLDLSCYPEQIEA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcttgaaagtattgaagttgaaaacttcaaatcttatcgtgggaaaattcta
atcccattcaaaaagttcactgctataattggaccaaatggatcaggaaagtccaacctt
atggacgccatcagttttgtccttggtgagaagacgagcagtttacgagtgaagaaatta
tcggatttaattcacggagctccgattggtcgaccaatatctacacgggctagagttact
gctacttattgtaattcaaatggagaaaagacagaatttacgagaataatcaaaggaact
tccgctgagaatcgtatcaatgataaagtggtgacacacgcagagtacaacaaagaaatg
gaaaaaatcaatattttcatcaaagtgaaaaactttcttgtcttccaaggtcaagttgaa
tcaatagcaatgaaaaacccaaaagagcgaacccagttatttgaggagatcagtgggtcg
ggtgagtttaaagaggaatatgagaaagcaaagtcagaaatgagcaaagcagagcaagaa
acacaatattcctttcacaggaaaaaaggaattgctgcggaaaggaaggaagcgaaacag
gaaaaggacgaagctgataaatatcgtaagttgagagatgattattccaaccttcgactc
caactgatgctcttcaaactcttctataatgagaaggagattgaagccatacgagctgaa
gctgatacaaagaacaaagacattcgccaccatataaggaaacgcgagaaatatgaggag
gagataaagaggaagaagcaggagcaagggaagatgatgagagaactctccgctcttgaa
agggcgattcaggagaaggaaacggagttaaataggaaacgtccaatgtatattaaggcg
aaagaaaacaccaactttgtgatgaagaaagttgaatctgcgaagaaatcgttgcgtaca
gcggagaaccgacacgagagtcacatgcatgtaatagaagatctacagaaacaactgcag
gaaattgaggaaagaagaaaagagtttgatggacaggtggagctagagagccagactgag
ggtcgagatttggaacttgaagaatctcagatcacagagtacaacaggttgaaagaggag
gcagctaaacgatcaactgctctcaatacagagattgagaaacttcagcgagaacagcaa
actgaccaagagaagttggatgctgagcgccgtaaaaagagcgagttatggtcccaacag
aaacagaagaaaaaagaacttgaagaatcaaagtcccgagttgataagttgaaagattac
attgaaacgagccataccacactacaagaacataagaaactgaaagtggatttagaaaag
caggttcaaagttcgttcgagagaattcgtgagatcaacatcgagttggaggaagtgatg
aaaaagcaaggagatgcaaaagtggatcggaccgagagctcgaggcaaaaacgtcgactc
gaattgcttgaaactcttcgcagacttttccctggagtgtatggacgtgtattagatcta
tgtgagccaatccacaatcgctacaagatagccatcaccaaggtgcttgggaaatacatg
tatgctatcgtgtgtgactctgaaaagacagcaagagattgcattcaatatatgaaggaa
caatgtgcggaacctgagactttcttgcctttggattatattgatgcaaaaccaacgaac
gaacagcttagaaccattagagaaccaaacggggtgaaacttgtgatagatgtaataaaa
tatgacttgcctgctattaaaaaagctttacaattcacttgcggcaactcgcttgtgtgt
gaaagcgctgaagatgcgagaaaagttgcgtttggtcaagtacaaaaacacaaggatggt
tttggaggctcagatgttcaaagaagaaaccaggctgtggccctggatgggactttgttc
caaaaatcgggagttatttcgggtggtgcaactgatttaaagaggaaagctcagcgctgg
gacgaaaaagttttggatattctgcaatctaagaaggaaaaactgacagaggaattgaaa
caagaaatgaagaaaaagagaaaagaagcagatcttaaaaacatcatcagtcaaattgga
ggattacaaaaccggatcaaatactctcaaaatgatcttgataacacggagaaggggaac
atgaaggaacacaaagagaaaattgaagaattggatcgtctcctgcaaggttttgagcct
cgtttcatggagatagaagagagaatgagaacaagagaaggagagataaattgtttccga
gcgagcatgaatgaagttgaagatcaagtgttccgaaacttctgcgttctcattggtgtt
ccaaacattcgtgtttacgaggagagagaattaagaagacaacaggagactttgaaaaag
aggttggaattcgataaccagaaatctcgtgtaacaaaccaattggaatatgagaactcg
cttgatacaaatcagaatgtggagaaatggagagaaatgattaaaaatgatgaagcaaat
ataagccatcataaagaggaagagaaaaaagcaatgaagttaatccaagagactgaaaat
gctcttcaagaagtaaagtcaaagaaaatacagaagagacgagattgtgatgagaagaca
acggaaattgaagatgtgagaaaagaccttgggaaactcaataaggaaatggctcagttc
caaaaggtgatcacatctcaggagttaaagattgaacagaagagggaacaaaaacactcc
ctcctccagcaatgtaagatggaagatatttctcttccaatgaaaagaggaacgatggac
gacattgatgaatcggaacatttgtccgaatccagcaatgcattaagtcaaagtacgagc
gccgtttatgataaagaagcaaagttggagcttgattatcgaaaactaccatctgattta
cggaatttagagcttgatgaagtgaagcgtgaaggagagcgcttgcagtcgcgcatgaat
gatttatcatcaacaattcaacgattcgttgccccgaacatgaaagcactctctcatctt
gatgaagttaagcgacaatatcatgaatcgaaggatcagttcgacagctacaggaaacgg
gctcgtaaacacagacaggattttgagatggttaaaaagaagcgtgtggaacactttaac
caatgcttcgattatgtggcaactaaaattgatgacatttacaaagatttatcaagaaat
aatagcgcacaggcttttctaggaccagagaatacagaagaaccatatttggaaggtata
acctacaactgcgtagcaccaggaaagcgatttcgaccgatggataatttatctggtggt
gaaaaaactgttgctgccctcgctcttatatttgccattcatgattatcaaccttcgcct
ttctttgtgttggatgagatagatgctgctttagacaacacaaacattggtaaagtagcg
gaatatatcaaacaaatgtcaaaccgagtccaatgtatcgtgatatcactaaaggaggaa
ttctacaacagagttgatgcgttagttggtatttatcctcagcaaattgacggctgcatt
tcaagtcgggttatcagtcttgatctgtcatgttatccggaacaaatcgaggcttga
DBGET
integrated database retrieval system
