Ciona intestinalis (yellow sea squirt): 100179722
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Entry
100179722 CDS
T01056
Name
(RefSeq) tetratricopeptide repeat protein 25 isoform X2
KO
K24254
outer dynein arm-docking complex subunit 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179722
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
ODA docking complex
100179722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_11
TPR_8
TPR_MalT
TPR_16
TPR_10
TPR_19
TPR_NPHP3
ANAPC3
RPN7
MIT
Motif
Other DBs
NCBI-GeneID:
100179722
NCBI-ProteinID:
XP_002129888
Ensembl:
ENSCING00000008392
LinkDB
All DBs
Position
9:complement(4493472..4498085)
Genome browser
AA seq
529 aa
AA seq
DB search
MYDDEDGEDGPKSSFTTYLAEGDKLYNAGEYQKALESYTTALEIEAKSETGLVARSKCYL
QIGDAQAALQDAEASLSDNKEFHKGLYQKAEALYQMGDFEYALVFYHRGHKLRPELQEFR
LGIQKAQEAIDNCVGSPSSVKLENKGDLSFFNKMDEGKGKAKQRGQYRPPQKPAAMKTNR
ALGKTRGGTSSRTAKALLGELYADKEYLEKLLKDDDLVKGSSGGMSIYDLVTSGINYLDT
RTEFWRQQKPMYARKRDRLMMQQKWSNRKTDRISDPTTFILKNLEEIDSYLADGKGADSL
SLAVATLRTVNRLSDSEIPNKPDVVANLHSCIGNAHLELGQTDEALDHHQKDLEISEKHN
FQDARSRALDNLGRVYARVGKFQKAIDCWQEKLPLSKSAVERTWLFHEIGRCHLELGESE
KARDFGLKSLQEAKEAEDDVWQLNAGVLTAQAEVKLGEYEKALESFQQSLETAKLQGDDG
AEGAITKAIEDVKNKIEKQKESEQTSEAEPLKEEEETEREEQQEEENKE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgatgaagatggagaagatggaccaaagagttcattcacaacttatttagct
gaaggcgacaaactatataacgcaggagaatatcaaaaggcattggaaagttatacaact
gcactggagattgaggcaaaaagcgagaccggtttggttgcccgttctaaatgttactta
caaattggagatgcacaagctgcgttgcaagatgcagaagcctcactttccgataataaa
gaatttcacaagggtttgtatcagaaagcagaagcattgtaccagatgggagactttgaa
tacgcacttgtcttttaccatcgaggccataaactgagaccagaacttcaggagttccga
cttggtatccagaaagcacaagaagcaattgataattgtgttggaagtccatcatctgtt
aaattagagaacaaaggagatttatccttctttaataaaatggatgaaggaaaagggaaa
gcaaagcaaagagggcaatacaggcctccacaaaaacctgcagcgatgaaaacaaacaga
gcacttggtaaaacgaggggtggtacaagcagtaggactgctaaagcattactgggtgaa
ttatatgcggataaagaatatctggaaaaacttcttaaagacgatgatctggtgaagggg
agttctggtggaatgagtatttacgatcttgttacttctggtataaactaccttgataca
agaaccgaattctggaggcagcagaaacccatgtacgctcgcaagcgtgacaggctcatg
atgcaacagaagtggtcgaatagaaagacagatagaatatcggatccaacaacatttata
cttaaaaacttggaagaaatagattcatatttggccgacggaaaaggtgccgacagtctc
tcacttgcagtggccactttacgcacagtaaaccgactttccgatagtgaaatccccaac
aaacctgatgttgttgcaaatttacacagctgtattggcaacgcacaccttgagttgggt
caaactgatgaagctttagatcatcatcagaaagatttggaaatctcagagaaacacaat
ttccaagatgctcgttcccgcgcgcttgataatctaggtcgagtttatgcaagagttggg
aagttccagaaagccattgactgctggcaagagaagcttccactcagcaaatcagcagtt
gagagaacttggcttttccatgaaatcggtcgatgtcatctggagcttggtgagagcgaa
aaagcgcgagattttggtctaaagtcattgcaggaagctaaagaggcagaggatgacgtg
tggcagttaaatgctggagtgctgactgcacaagctgaagtaaagcttggtgaatacgag
aaagctttagaatctttccaacaatcacttgagacagccaagttgcaaggtgatgatggg
gcggaaggtgctatcactaaagctatcgaagatgtgaagaataagattgagaaacagaaa
gaaagtgagcaaaccagtgaagcggaaccattgaaggaggaagaagagacggagcgggag
gagcagcaagaggaggagaacaaagaatag
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integrated database retrieval system
