Ciona intestinalis (yellow sea squirt): 100179728
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Entry
100179728 CDS
T01056
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100179728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179728
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100179728
Membrane trafficking [BR:
cin04131
]
Endocytosis
Macropinocytosis
Sorting nexins
100179728
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100179728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
TcA_RBD
Motif
Other DBs
NCBI-GeneID:
100179728
NCBI-ProteinID:
XP_004225959
Ensembl:
ENSCING00000004211
LinkDB
All DBs
Position
4:complement(1740821..1746090)
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AA seq
414 aa
AA seq
DB search
MMDGMDDSPDLLADGGERNGQRSVSVDLTDNSLLVDISDALSEKDKVKFTVHTKTTMKEF
KGNEFSVVRQHEEFVWLHDSYVDDERYAGLLIPPSPLRPDFEASRDKLAKLSEGEGSMTK
EEFSRMKQELEAEYLAIFKKTVAMHEIFLCRLASHPTLKNSHNFRVFLEYEKELNVRGKN
KKEKITGFFKNITKTADETLLLSGQKDSDEFFEHEKSFMSEYHIRIKDATLKIDKVTITH
KKCANDYSHIAMALQSLATVENSIAMSHKKGLDRSLLKVHESLEKVRKLEARAASDVDLK
LADLLRYYFRDTQACKDLLYRRARTLANYENANKELDKARSRGKNVPQAEAQQKTAREKF
EVLSEVGKQELTEFKGRRVTAFRKNLIELGELQLKHSKAMVQVLKGCISTIEQI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggaatggatgatagtccagacttgctggcagatggaggagaaagaaatggt
caaagatctgtcagtgttgacttgacagataactctctgctagtagatatctctgatgct
ttaagtgaaaaagataaagtaaaatttaccgttcacaccaagacaacgatgaaagaattt
aagggcaatgaattttctgttgtacgtcaacatgaagagtttgtatggttgcacgattca
tacgttgatgatgagcgttatgcaggtttactgattcccccctctcctttgcgacccgat
tttgaggcttcgcgtgacaaacttgcaaagctaagtgaaggagaaggctcaatgactaaa
gaagaattttccaggatgaagcaagaactagaagcagaatatcttgcgatcttcaagaaa
acagtagcaatgcatgaaatctttttgtgccgtcttgcctcccatcctacacttaaaaac
agccacaactttcgggtgttccttgaatatgaaaaagaattaaatgttcgtggaaagaac
aagaaagaaaaaatcactggattttttaaaaacattaccaagacagcagatgagacacta
cttctctcgggtcaaaaagacagtgacgagttttttgagcatgagaaatctttcatgagt
gaataccacatcagaatcaaggatgcaacattaaaaattgacaaagttacaattacacac
aaaaaatgtgcgaatgactattctcatattgccatggcactgcagtccttagctacagtt
gagaactcaattgcaatgagtcataaaaaaggactagacaggagcttgctaaaggtccat
gaatcacttgagaaagtccggaaacttgaggcaagggcagcttcagatgtggatttgaag
cttgccgatcttctaagatattacttccgtgatacacaagcatgtaaggaccttctatac
cgacgagctcgtacactggccaattatgaaaatgcaaacaaagagcttgacaaagctagg
tcaaggggaaagaatgtaccacaggccgaagctcagcaaaagactgcgagggagaaattt
gaagtcttgtctgaggttggtaagcaggaactgacagagttcaaaggtcgcagggtcacg
gccttccgtaaaaatttaattgagcttggggagcttcaactcaaacattccaaggctatg
gttcaagttctaaaaggctgcatatcaacgattgagcaaatttga
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