KEGG   Ciona intestinalis (yellow sea squirt): 100179728
Entry
100179728         CDS       T01056                                 
Name
(RefSeq) sorting nexin-6
  KO
K17920  sorting nexin-5/6/32
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100179728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100179728
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100179728
Membrane trafficking [BR:cin04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    100179728
Domain-containing proteins not elsewhere classified [BR:cin04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100179728
SSDB
Motif
Pfam: Vps5 PX TcA_RBD
Other DBs
NCBI-GeneID: 100179728
NCBI-ProteinID: XP_004225959
Ensembl: ENSCING00000004211
LinkDB
Position
4:complement(1740821..1746090)
AA seq 414 aa
MMDGMDDSPDLLADGGERNGQRSVSVDLTDNSLLVDISDALSEKDKVKFTVHTKTTMKEF
KGNEFSVVRQHEEFVWLHDSYVDDERYAGLLIPPSPLRPDFEASRDKLAKLSEGEGSMTK
EEFSRMKQELEAEYLAIFKKTVAMHEIFLCRLASHPTLKNSHNFRVFLEYEKELNVRGKN
KKEKITGFFKNITKTADETLLLSGQKDSDEFFEHEKSFMSEYHIRIKDATLKIDKVTITH
KKCANDYSHIAMALQSLATVENSIAMSHKKGLDRSLLKVHESLEKVRKLEARAASDVDLK
LADLLRYYFRDTQACKDLLYRRARTLANYENANKELDKARSRGKNVPQAEAQQKTAREKF
EVLSEVGKQELTEFKGRRVTAFRKNLIELGELQLKHSKAMVQVLKGCISTIEQI
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgatggacggaatggatgatagtccagacttgctggcagatggaggagaaagaaatggt
caaagatctgtcagtgttgacttgacagataactctctgctagtagatatctctgatgct
ttaagtgaaaaagataaagtaaaatttaccgttcacaccaagacaacgatgaaagaattt
aagggcaatgaattttctgttgtacgtcaacatgaagagtttgtatggttgcacgattca
tacgttgatgatgagcgttatgcaggtttactgattcccccctctcctttgcgacccgat
tttgaggcttcgcgtgacaaacttgcaaagctaagtgaaggagaaggctcaatgactaaa
gaagaattttccaggatgaagcaagaactagaagcagaatatcttgcgatcttcaagaaa
acagtagcaatgcatgaaatctttttgtgccgtcttgcctcccatcctacacttaaaaac
agccacaactttcgggtgttccttgaatatgaaaaagaattaaatgttcgtggaaagaac
aagaaagaaaaaatcactggattttttaaaaacattaccaagacagcagatgagacacta
cttctctcgggtcaaaaagacagtgacgagttttttgagcatgagaaatctttcatgagt
gaataccacatcagaatcaaggatgcaacattaaaaattgacaaagttacaattacacac
aaaaaatgtgcgaatgactattctcatattgccatggcactgcagtccttagctacagtt
gagaactcaattgcaatgagtcataaaaaaggactagacaggagcttgctaaaggtccat
gaatcacttgagaaagtccggaaacttgaggcaagggcagcttcagatgtggatttgaag
cttgccgatcttctaagatattacttccgtgatacacaagcatgtaaggaccttctatac
cgacgagctcgtacactggccaattatgaaaatgcaaacaaagagcttgacaaagctagg
tcaaggggaaagaatgtaccacaggccgaagctcagcaaaagactgcgagggagaaattt
gaagtcttgtctgaggttggtaagcaggaactgacagagttcaaaggtcgcagggtcacg
gccttccgtaaaaatttaattgagcttggggagcttcaactcaaacattccaaggctatg
gttcaagttctaaaaggctgcatatcaacgattgagcaaatttga

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