Ciona intestinalis (yellow sea squirt): 100179736
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Entry
100179736 CDS
T01056
Name
(RefSeq) reticulophagy regulator 3
KO
K23880
reticulophagy regulator
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179736
Membrane trafficking [BR:
cin04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100179736
ER-phagy
ER-phagy recepters
100179736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_RETREG1-3
INSIG
Reticulon
DUF639
Motif
Other DBs
NCBI-GeneID:
100179736
NCBI-ProteinID:
XP_002126378
LinkDB
All DBs
Position
1:complement(7248328..7250320)
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AA seq
405 aa
AA seq
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MEGGAGDASQSDVQTNKIEKLSQKLYNWSRSYESVILYFQRLLVWEKPTHSSVFLILIHI
GFWYLTARSSHAIGFLSSMLLGLVWLDMWKHKIWPEIRAEEPDPEAEWGELHPKLLSLPE
LCQIIAEGLVTLTTVYKKIVEFKSDFPGRFCGIFCFFCLCLNFIGSLVPGVLLAYTIMLC
LLFWPLLWYNKILERTYTQVEPFLMQLQYTLKQRPATTYYMTKYLKAKKDSKLEENIDDD
ISEFVPELDEKTAAVLARAITDDSELSETDEEILAQEIPLFSRASTPDDLASKEVYVSSL
PNQFPPIDADDSDDEDLGIPKSMVHEKDESEQPHGGIQEQLSAMKADMLNNAIKTKVWDT
FNNLTKSMQQPQGLDAGEQNIDQNSDSSTPSSDFEFISVDNEGPA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggtgctggggatgcctcgcaatcggacgtccaaacaaataaaatcgaaaag
ttatctcagaaactgtataactggtcgcgaagttacgaatctgtcatcctgtactttcaa
cgattgttggtatgggaaaagccaactcattcctctgtgtttcttattttaatccacatt
ggtttttggtacttgactgcgcgtagtagccacgctattggatttttatcctccatgtta
cttggcttggtatggttggacatgtggaaacataaaatctggccggagattcgtgcagaa
gaaccggatcccgaagcagaatggggggagctgcatccaaagctacttagtttgccagaa
ctgtgtcaaatcattgcagaaggcttggttactttaactacagtttacaagaagattgtg
gagtttaaaagtgattttccaggcaggttttgtgggatattctgttttttttgtctttgt
ttaaattttattggaagtttggttcctggagttttgcttgcttacacaattatgttgtgt
ttgttattttggccactgctttggtataacaaaattttagaacgtacatacacacaagtg
gagccatttctaatgcaactacaatacacattaaagcagagacctgcaaccacgtactat
atgaccaagtatcttaaagcaaagaaggattcaaagttagaggaaaacattgacgacgat
atttcagagtttgttccagaacttgatgaaaagacagcagctgttttagctcgcgcgatc
acggatgattctgagctttctgaaactgacgaagaaatcttggctcaagagatcccatta
ttttcgcgtgcaagcacacctgatgacttggcatccaaagaagtttatgtttcttcactt
ccaaatcaatttcctccaatagatgcagatgattctgatgatgaagaccttggcattcca
aaatcaatggtacatgaaaaagatgagtccgagcagccacatggtggaatccaagagcag
ttatccgccatgaaggccgatatgctgaacaacgccattaaaactaaagtttgggatact
tttaacaatcttacaaaatcaatgcaacagccacaaggtttggatgctggggagcaaaat
attgaccagaacagcgactcttcgaccccatcaagtgattttgaatttatatctgtggat
aatgaaggaccagcatga
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