Ciona intestinalis (yellow sea squirt): 100179740
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Entry
100179740 CDS
T01056
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100179740
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100179740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_2nd
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100179740
NCBI-ProteinID:
XP_002119227
LinkDB
All DBs
Position
2:3388187..3391812
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AA seq
396 aa
AA seq
DB search
MSIFSWVEGRRQGVQSIYQKSGQPCSDFGRFLNQHASTQKIENILWKQLYKKSSKNDHRH
NVGYGGVFGLKYSPDGKLVVAACERDAVVMLDPRTMSVVNKREHVHTKHCNTISFIDNLL
FTTCSDDGNVAIWDIRSMREEVLKLCGHTSWVKNVEYHKPSKCLVSAGFDDNIITWDINN
LLPNGECKSEVVLTCPRLMRMRLSPDGNSMYISTIQAVDLIAIHNLEIEKLTTDINKLVL
NDEFGDYFVQFNNTQVPVNREEPFEAQSQPMTRRNHLELYYGHSSDLTKRDPINVFCQSI
DVHPQNMAVVLRYDRFATSVEKLTSVHNTWSHYHGEHQGNNKWQADAQGNSSIPLPRGQT
TNVMMEESLDNIEYIQEVSFSPCGTIYPASPFGYGH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattctcctgggttgaaggaaggcggcaaggtgtccaatccatataccagaaa
tcaggtcaaccttgctccgattttggacgttttctcaaccaacatgcctcaactcaaaaa
attgaaaacatactttggaaacagctttacaaaaagagtagcaagaatgaccacagacat
aatgtaggttatggaggcgtgtttggattgaagtattcaccagatggtaaactggtagta
gcagcatgtgagcgtgatgcagttgtgatgcttgatcctcgtacaatgagtgtggtgaat
aaacgtgaacatgttcatacaaaacactgcaacacaatttcatttattgataaccttctc
ttcacaacttgctccgatgatggaaacgtcgcaatctgggatattaggagcatgagagag
gaagttttaaagctttgcggtcacactagttgggtgaagaacgttgaatatcataaacct
agcaaatgtcttgtatctgcaggatttgatgataatatcattacatgggatataaacaat
ttgcttccgaatggagaatgcaaatctgaagtcgtattaacttgtcctcgattaatgaga
atgagattatcacctgatggtaacagtatgtacatttctactattcaagctgtagatctg
attgcaatccacaatcttgagattgaaaagcttaccacagacataaacaagcttgtatta
aatgatgagtttggagattatttcgttcaatttaacaacacacaagtccctgtcaatcgt
gaagaaccatttgaagcacaatcacaaccaatgacaagaaggaaccacttagaattgtac
tatggtcacagttctgaccttacgaagcgtgaccctattaatgtcttctgccaatctatt
gatgtgcacccacagaacatggctgttgtattgagatatgacaggtttgcaacctcagtg
gaaaagttaacttcagtgcacaacacatggtctcactaccatggtgagcatcaagggaat
aataaatggcaggcagatgcacaaggtaattcgtctatcccgttacctcgtggccagacc
actaacgtaatgatggaagagagccttgacaatattgaatacattcaagaagtctcattc
tcaccatgcggaacgatttatccggcatctccatttggctatgggcattag
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