Ciona intestinalis (yellow sea squirt): 100179741
Help
Entry
100179741 CDS
T01056
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A
KO
K16779
Rab-3A-interacting protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179741
03036 Chromosome and associated proteins [BR:
cin03036
]
100179741
Membrane trafficking [BR:
cin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100179741
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100179741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
Matrilin_ccoil
Spectrin_7
Fez1
Motif
Other DBs
NCBI-GeneID:
100179741
NCBI-ProteinID:
XP_026693398
Ensembl:
ENSCING00000002358
LinkDB
All DBs
Position
14:4381577..4387118
Genome browser
AA seq
366 aa
AA seq
DB search
MTTVAATCEVQTNELHDDSSSSETNSLDSINGSLNHTTNCRNEAAYIAMEKELDKTKQDL
EKKNAECENLQSIRSKVENELEDLTASLFEEANKMVYEANMTRHKAEKKLAEAEGMIEAL
RLEVDALKSLVLTSTPSNPNPTSHPQLIKKKNASPIRNLKLPKSWSKDKLIQPQLEVPKL
DEEIHLKVDDQVKVEVDLTLQAELSMWLAANLSSRETCGCDTPLLYCVDQCVAIAQSLFL
KRVSREDIQPCLDFDNVDLAVKVSKCIHTNSLSVEEMPTSEVSRKCSLTQSTTICSHRLK
LGDSSTWYSVSKTARNRITSVCDFMQYIRYIRQGIVKHTGSQIYDEVIKLRIRMNHARLG
SSFSEI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgtagcagctacgtgtgaagtccaaacgaacgaattacatgacgattccagc
tcttcagaaacgaatagtttggatagtataaatggaagtctaaaccatacgactaactgt
agaaatgaagcggcgtatatcgcaatggaaaaggaattagacaaaacgaaacaggacctt
gagaagaagaatgctgaatgtgagaacttacaatcaattcgaagtaaagtcgagaacgaa
cttgaagatttaacagcgagtttatttgaagaagcgaacaagatggtttatgaagcaaat
atgacgagacataaagctgaaaagaaactagctgaggcagaaggaatgattgaagcgtta
aggttggaagttgatgcattgaagtcccttgtacttacttcaacaccaagcaaccctaac
ccaacatcccatccacagttgattaagaaaaagaacgcttcaccgatccgaaatcttaaa
cttccgaaaagttggagcaaagataagttgattcaaccccagttggaggtcccaaagttg
gacgaggaaatccatttaaaggttgatgatcaagtaaaggttgaggttgacctaacgtta
caagccgagttatctatgtggcttgcagcaaacttatcgagtagagaaacatgtgggtgt
gacactccattattatattgtgtggatcagtgtgtggctattgcacaatcattgtttcta
aagcgagtgtcacgtgaagatattcaaccttgtttggatttcgacaacgtagacctcgca
gtgaaagtatctaagtgtattcataccaactcgctgtcagtggaagaaatgccaacgtcg
gaagtttcaaggaaatgctctctcacccaatctaccacaatatgttcccatagactgaag
ttgggagactccagtacctggtactccgtgtcaaagaccgcaagaaatcggatcacatcg
gtttgtgacttcatgcaatatattcgttacatcagacagggaattgtgaaacatacagga
agccaaatatatgatgaagtcatcaagttaaggattagaatgaaccatgcaagacttgga
tcttctttcagtgaaatttga
DBGET
integrated database retrieval system
