Ciona intestinalis (yellow sea squirt): 100179750
Help
Entry
100179750 CDS
T01056
Name
(RefSeq) probable asparagine--tRNA ligase, mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100179750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100179750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100179750
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
100179750
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100179750
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100179750
Prokaryotic type
100179750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Glyco_hydro_77
YosW
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
100179750
NCBI-ProteinID:
XP_002119984
Ensembl:
ENSCING00000004008
UniProt:
F6VXM8
LinkDB
All DBs
Position
2:complement(1601267..1605660)
Genome browser
AA seq
471 aa
AA seq
DB search
MFRLCKLSYSTVTTALKRFKIKDVVNGEAVSQNGWIQGWVQSIRKHKNFMFVDIVDGTSL
NPLQVVLPSHMFNSQLQNGAAVSANGTFVETDLNVNKIEMVCEEIQVVGPCDPETYPFLK
HTPHDMQHLRSYPHLRMRRTSMINAFKLRNQLEMLFHEFFQNEGFTHVHTPIITLSDCEG
AGELFSIKSDTSTNTDMENSENHFFNKPAYLTVSGQMHLEACAMSLGSVYTLSPVFRAEH
GISRKHLSEFRMLEVEVAFTQDLHEILDLIEDSIKFCIERVQSVPLKKFDDGYKDIPPQH
HKAVKNATCSNYVRIPYSEALEILQKNSHKLTTAAPVWGDDFNTDQESFLVKHFGLTPVF
IINFPKVAKPFYMYANNDNNTVAAVDLIFPFCGEICGGSLREHRLELLQDSLRTSGLNEK
DYEWYLDLRRFGSAPHGGYGLGFDRLVHFLLGTRNIKDAVPFPRTPHSCPL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctgtgcaagcttagctacagtactgttactacagctctaaaacgttttaaa
atcaaagatgttgttaacggagaagcagtttctcaaaacggatggatccagggttgggtg
caatcaatacgaaaacacaagaactttatgttcgttgatattgtggacggaacgtcattg
aaccctttgcaagtcgtattgccttcacatatgttcaatagccagctgcagaatggtgct
gcagtatcagccaacggtacatttgttgaaactgatttgaatgtgaacaagattgagatg
gtgtgtgaagaaattcaagttgttggaccttgtgatccagaaacttatccatttctgaaa
cacactcctcatgatatgcaacatctgaggagctacccgcatcttcgaatgaggagaaca
tccatgattaacgcatttaaactccggaatcaactagaaatgttatttcatgaattcttt
cagaatgaaggttttacacacgtgcacactcccatcatcactttgagtgactgtgagggt
gctggcgaactcttcagcataaaatccgacacatccacaaacactgatatggagaactct
gaaaatcatttttttaataaacctgcctatttaactgtatcgggtcaaatgcatctggaa
gcatgcgcgatgtctctcggcagtgtttacaccttaagtcctgtgttccgtgccgagcat
ggaatatcaaggaaacatctgagcgagttcaggatgctggaagtggaggtggcttttaca
caggatttgcatgaaattcttgaccttatagaagacagcatcaaattttgcattgaacgg
gtgcaaagtgtcccactaaagaaatttgatgacggttacaaggatattccccctcaacat
cataaagctgttaagaatgcaacatgcagtaattatgtaagaattccgtattctgaggca
cttgaaatactgcagaagaattcacacaaattaacaacagcagctccggtttggggagat
gattttaacactgaccaggaatctttcctggttaaacattttggattaacaccagtgttt
atcatcaactttccaaaagtagcaaaaccattttacatgtatgctaataacgacaacaat
acagtagctgcggtggacctaatattccccttctgtggtgaaatatgtggtggaagtctt
cgagaacatagacttgagctgctgcaggattcattgcgtacgtctggtctcaatgaaaaa
gattatgaatggtacttggacctacgtaggttcggcagtgcacctcacggcggttatgga
cttggttttgatcgacttgtgcattttctccttggaactcgtaacataaaagacgccgtg
ccttttccaaggaccccacattcttgcccgctttaa
DBGET
integrated database retrieval system
