Ciona intestinalis (yellow sea squirt): 100179761
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Entry
100179761 CDS
T01056
Name
(RefSeq) putative elongator complex protein 4
KO
K11375
elongator complex protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100179761
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100179761
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAXNEB
ATPase
DUF7125
LIF_OSM
Motif
Other DBs
NCBI-GeneID:
100179761
NCBI-ProteinID:
XP_002121089
Ensembl:
ENSCING00000007918
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Position
4:complement(1484718..1488355)
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AA seq
365 aa
AA seq
DB search
MKRTTFTKKSGKGASGVVIPGTHPSLHNGLLLVSTGIPSLDVVLGGGLPVGSIMMVEEDL
FGRFSKIILKYYLAEGVMCNHSLFVASFEDKNEEILTQLPKPVTKDILTGSKTDDMKIAF
RYRDLSTATNSLDAPPKYGHYYDISRTMDKIDYEHCGITTLNLNKLIREDTVVPVSTMLR
STLNKLNTIASDIQHTAPKSIVAKTKLNIIRAAIPGLGSPLWCENTEDNVSSIARFLHAL
RALARNSLMTCVVTVPTHLYTPHQVNVIRHMVDCSIELESFSKEKTNPVFSQFHGLIRLK
KLPCLNSLVPFIPQSLDLGFELKKTKFQIKCLHLPPDMSDGAAESDGKTQKSPCDSNTLH
RKLDF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaacaacgttcacgaaaaagtctggtaaaggtgcaagtggtgttgtaatccca
ggtactcatccatctctacacaatggtttgctccttgtttcaaccgggataccttcattg
gatgttgttcttggtggaggattgccagttggaagcattatgatggttgaagaagatctg
ttcggaagattttccaaaattattctgaagtattaccttgctgaaggcgtcatgtgcaat
cactcactttttgtggcctcgtttgaagacaaaaacgaagaaattttgacacagttgcca
aaacctgtaaccaaagatatcttgactggttctaaaacagatgacatgaagattgctttc
agatatcgtgatctttctactgctacaaactctctggatgctccacccaaatatggtcat
tactatgacatcagcagaactatggataaaatagattacgaacattgtgggatcacaact
ttgaatttaaacaaacttattagagaagatactgtggttccagtatctaccatgcttagg
tcaacattaaacaaactgaatacaattgcatccgacatccaacacactgcaccaaagtct
attgttgcaaagacaaaactaaacattatcagagcagcgattcccggtctcggttcacca
ctgtggtgtgaaaacactgaggataatgtatctagtattgcaaggttcctgcatgcactt
agagcattagctcgtaactcacttatgacatgcgtggttactgtcccaacacacttgtac
acaccacaccaagtaaatgtcataaggcatatggttgactgttcaattgaactggagtcg
ttttctaaagaaaagacgaaccctgtgttcagtcagtttcatggtttgattcgtttgaag
aagcttccatgtttaaactcgcttgttcctttcattcctcaatctcttgaccttggtttt
gaactcaagaaaacaaagtttcagattaaatgtttacacctgcctcctgacatgtcagat
ggtgcagctgaaagtgatggtaaaacgcaaaagtcaccctgcgattcaaacactttgcac
agaaaattggacttttaa
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