Ciona intestinalis (yellow sea squirt): 100179786
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Entry
100179786 CDS
T01056
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179786
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
100179786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML
WDR55
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
CFAP43_N
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
EIF3I
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
100179786
NCBI-ProteinID:
XP_018671542
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MQAYGTLDVKWAKGFKGDRLSHVDRDMVCFSCGNSIKFVNVVTGAESVFQPPGGAVCQVT
SSSHHRMFAVAEEGLNPIITIYNFPSCEVVCALEAGALLGYSQLQFSFNGSFFAATSSIP
DFSIFVWDWQTGKLKCHEKLPGESPVTSLLFNPLNKREISTISETHVSIWTLEECNEIST
MKSKVVNLPTTDGVILSNGEDLASRSGTRQGFNVHLPTSTRAGLVGGNADKFEPPELRRP
RVIPSSQCWSSRGEIYVGCVGGQLFRVDGASGNPALLLGGISDSLLVGEIECGMFHSISL
NSEGLVAGGDDGTLRLIQLDNNGVKITELHKGMQPITCLSFAPPLYVDLVLSTSSGEIQH
YSLVERECGPIITTRTGDFVGAGFTCAGKLAVTCREDGELQIWSCEDGSLVASFSLCTRT
CSLSCCPSSPVVAIGTWTGHVCYIDTSSLLSEEINLRQVGSTRIHHSPVTYLKYNAGGDF
LLTASEDEPHIFIIDAKPSSGFQCIGYVDCDGTIKDISIHHNSSTSTVLAVMSQSNDNGD
YDSNNLIMFSLTSELLSNTDGHFVSLRNNFKDTSVKLTRHSLSVSVDSAIVTTIGDNIEI
AALSSESKNLLQFKLPHTTQGPTPIHPVSEHYGHQLSGGSVILSPHGKWVASFAPDGDVI
VRDVSNWDSITRFQPHSYIHGGVKTLTFSPDASHFISVGYSDQACMCYQWNFTSKGQSAG
NNAVEYARVLNMRLRSVMDVEGDVLAAMEEWSPSTKIATPDQEEQDVSDVTRPKSGARSE
VTMTPTPTPQSDATWLDARTLLAVKEENAKYDEVKRDLRKNIKELRKTILGMMENNNSLP
DLEQLRHDEYNLDTDEQSKMQEQQDQRVQEIREEIEFENLAQRYLAYLITKQCWDDMVTK
GRSLKGFTSSCSVTNYPTTSVSSEENAILNKVSRMRKIEMALNTVQKSIVETGTKQGGDE
DEEEEKVGLSLHGSLGPNYSGGNEMFYSQFDLHTREEKITQIILVKDAIRRIKSSFNEAF
TNIFRNKEQEITRTMERNVRIREIMKELDLDADSVKDPQMDVDEKPEKVFIVTDDEVTVE
RVLSKEQQKEKEEQERVEQERKEAAKQDNKRERALTDMMGGVLEVKKEDALKQDIPTPDF
MDEKLEKDWTDEEKKKAKEHQKKLKDLQEEREKYRKNLENELKKLQQNNLDAITNYDESL
QQLFNRKVKTEMVVNQEELKILRMTQAIMVADELATHEDQLNKLLELKNKFKASSSSRLE
DIQMLVKDYEEINDSTIAEDKMLDRAFKRDFSDVPLSISDQLYKLFKRRPRQQKPRTLAE
RSNSLDPYGVSDFSAEVTIFSTQDGLAELDSEVNIPEGVDSALWERLCNARRNKVESESN
VKQSVTTLADMMKYLHHRQNEDEVLEHSIDDVIKQQTKLCEDSMKNMLNLEVQFLLKQGQ
VEINCGPFISDYSDSILIHRGVVEDLNGTIRTLGESKVAAMTESKDFKKGIHQLEWERKR
MVMQMEDLHNRARHIQMLKLTKDLQAFLNEENNAAKQSQQVAVLEQTLALQDKQLQKNIS
HKSKLHRDLERTIRLKEQENHQLDRVLEELHVSVSERKNIADVNAGERAKNTADKRLKGI
VQRRKLVDLAKAQAQEVAVLRAEVERLRMKTFPALVQVER
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctacggcactttggacgtaaagtgggccaaaggcttcaagggggatcggtta
tcccacgttgatcgcgacatggtttgtttctcgtgcgggaacagcattaagtttgttaac
gtggttactggcgctgagagcgtgttccaaccaccgggtggtgctgtgtgtcaagtgaca
tcatcatcgcatcaccggatgtttgctgtagcagaagaaggactgaacccaattatcaca
atttataatttcccatcttgtgaagtggtgtgtgcattagaagctggtgcacttcttgga
tattcacaactccagttttcattcaatggaagttttttcgcggcaacttcatcaattcct
gacttctctatatttgtgtgggattggcaaaccgggaagttaaaatgtcatgaaaagctt
ccaggggaatcccctgtgacatcactactctttaacccgctaaacaaacgagaaatttct
acgatttctgagactcatgtttccatatggacgttggaggaatgcaacgaaatatcgacc
atgaaatctaaagttgtgaatcttcccactactgatggtgtaatcctctcaaatggtgaa
gacctcgcgtcacgatcggggacacgacaaggatttaacgttcatctcccaacgtcgaca
agagctggcttggtgggtggaaacgcagacaagtttgagccacctgagcttcggcgccct
cgtgtgatcccatcctcgcaatgttggtcaagtcgcggtgaaatatacgtcgggtgcgtc
ggtgggcaactgtttcgtgtcgatggggcaagcggtaaccctgctttgttgctgggtgga
atatctgattcgttattggtaggcgagatagaatgtggaatgtttcacagtatttcattg
aattctgaaggattagtagcagggggggacgatgggacgctcaggttgatacaacttgat
aataatggtgtcaagataacagagttacacaaaggcatgcaaccgatcacttgcctcagc
tttgcccccccactttatgtcgacctcgttctatcgacatccagtggtgaaatacaacat
tatagtttggttgagcgagaatgtgggccgataatcacgacgagaaccggagattttgtt
ggggcgggttttacatgcgctggcaagctggctgtgacttgtcgtgaggatggggaactc
caaatatggtcgtgtgaagacggctctcttgtcgcaagtttctccttgtgcacaaggacc
tgttccttatcatgttgtccatcaagcccagtggttgccatcggcacatggacgggacat
gtttgttacattgatacaagctcgttactctccgaagaaatcaacctccgacaagttggt
tcaacaagaatacaccattcaccagttacatacttaaagtacaatgctgggggtgatttt
ctcctcacagcatccgaagacgaacctcacatatttatcattgatgcaaaaccatcctca
gggttccaatgcataggatacgtagactgtgacggaacaatcaaagatatttcaattcat
cacaatagttcaacatcaactgtacttgctgtgatgtcacaatcgaatgacaatggagat
tatgattcaaacaatctcattatgttctcacttacatctgagttgcttagcaacaccgac
ggccattttgtttcacttagaaacaatttcaaagatacttccgtaaagttaacccgacac
tcgttatccgtgtcggttgattctgctattgtcacaactattggcgataacatagaaata
gcagctttgtcgtcggaaagcaagaatttactccagtttaaattacctcatacaacccag
ggcccaacccccatccacccagtgtctgaacattatggccaccaactatctggaggttcc
gtcatattatccccgcatggaaaatgggttgcttcatttgctccagatggcgatgttatt
gttagggatgtgtccaactgggatagcatcacaaggttccaaccacactcctacatacac
ggtggggtaaaaactttgacgttttcaccggatgcttctcacttcatatctgttggatat
tccgatcaggcttgtatgtgctaccaatggaatttcacaagtaaaggccaatctgctggc
aacaatgctgttgaatacgcgcgtgtattgaacatgaggttacgaagtgtaatggacgtg
gaaggtgacgtgttggctgccatggaggaatggtcgccatctacaaaaattgcaactcct
gaccaagaagaacaagacgttagtgatgtcacaagacccaagtctggtgctcgtagtgaa
gtgacaatgaccccaaccccgaccccacagtccgatgcgacgtggctcgatgcacggacg
ttgcttgctgtcaaagaagagaatgctaaatatgacgaggtgaagagagacctcaggaag
aacatcaaagaattaagaaaaacgatcctcgggatgatggaaaacaataattctctcccc
gatttggagcaacttcgtcacgatgaatataacctcgatacggatgagcagtccaagatg
caagaacaacaggatcaaagggttcaggagattcgcgaggaaattgaatttgaaaatttg
gctcagcgttacttggcgtatttgatcaccaagcaatgctgggatgatatggttacgaag
ggtcgatcattgaaaggattcacttccagttgttcggtcaccaactacccaaccaccagt
gtttccagtgaagaaaatgcaatcctaaataaagtgtcaaggatgagaaagatcgaaatg
gcgctcaacactgtccaaaagtcgatcgtggagacgggaacgaaacaaggaggcgacgaa
gatgaagaggaagagaaagttggtctgtctcttcatgggagtttgggacctaactactca
ggagggaacgagatgttttactcacagtttgatcttcacacaagagaagaaaagatcaca
cagattattttggtcaaggatgcaatccgaagaatcaagtcttcctttaatgaagcgttc
acgaacattttccgtaacaaagaacaagagatcacaagaacaatggaacgtaatgtgagg
ataagggaaataatgaaggaactcgatttagacgccgactcggtgaaagatccacaaatg
gacgttgatgaaaaacctgagaaagttttcattgttaccgatgatgaggtcacggttgaa
cgagtcctcagtaaagagcagcagaaggagaaggaggagcaggagcgtgtggagcaggag
aggaaggaagcggcgaagcaagacaacaaacgtgaacgtgcgttaacggacatgatggga
ggggtgttggaggtcaagaaggaagatgctcttaaacaggatattccaacccccgacttt
atggatgagaagttagagaaagactggactgacgaggaaaagaaaaaggcaaaagaacat
cagaagaaactaaaagacttgcaagaagaaagagaaaaatatcgaaaaaacctcgagaat
gaattaaagaaactccagcagaataatctggatgcgatcaccaactacgatgaatcactt
caacagttgtttaacaggaaagtaaaaacagagatggtcgtaaaccaggaggaacttaag
atcctccggatgacgcaagccatcatggtggctgatgaactcgcaactcatgaagatcaa
cttaacaaactattagagctcaagaacaagtttaaggcgagttcatcatctagattggaa
gatattcagatgctggtgaaagattacgaagaaatcaacgacagcacgatcgctgaggat
aaaatgttggatcgagcgtttaaacgagatttctctgacgtccctctttctattagtgat
caactgtataagttgttcaagagaagaccgagacagcagaagccacgcacgttagccgag
cgatcaaacagtctcgacccctacggtgtttcggacttttcggccgaagtaacaatattt
tcaacacaagatggccttgctgagctcgacagtgaggttaatattcctgaaggggtggat
agcgccctctgggagcgattgtgtaatgcaaggcgtaacaaagttgaaagtgaatcgaac
gttaaacaaagcgtaaccacgcttgcggatatgatgaagtatttacatcatcgccaaaac
gaggatgaagttctggaacattctattgatgatgtcataaagcaacaaaccaaattatgc
gaagactccatgaagaatatgttgaaccttgaggtccagttcctgctgaagcagggtcaa
gttgagattaactgtgggcctttcatatctgattattccgacagtatccttatacacaga
ggagtggtggaagatcttaatggaacaataaggacattaggtgaaagtaaagtagcggcc
atgacagaaagcaaagacttcaagaaaggaatccaccagttagaatgggagaggaagaga
atggtgatgcagatggaagatcttcataacagagctcgtcacattcagatgcttaaactt
accaaggacctacaagctttcttgaatgaagagaacaatgcagcgaaacaatcgcaacaa
gtggccgttctagaacaaactttggcccttcaggacaaacaacttcagaagaatatttca
cataaaagcaaattgcatagagatcttgaacgcacgatacggttgaaggagcaagagaac
caccagcttgacagggtgttagaggaactccatgtttcagtttccgaacgaaagaatatc
gctgatgttaatgctggtgaacgtgctaaaaacacagcagacaaacgattgaaaggaatc
gtccagcgtcgcaaacttgttgatcttgcaaaggctcaagcacaagaggtagctgtactg
cgtgcagaagtggaaagacttcggatgaaaactttccctgctcttgttcaagtggagcgc
tga
DBGET
integrated database retrieval system
