Ciona intestinalis (yellow sea squirt): 100179799
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Entry
100179799 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100179799 isoform X1
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00040
Pentose and glucuronate interconversions
cin00051
Fructose and mannose metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100179799
00051 Fructose and mannose metabolism
100179799
Enzymes [BR:
cin01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
100179799
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
100179799
NCBI-ProteinID:
XP_002125575
Ensembl:
ENSCING00000009383
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Position
3:3564284..3569317
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AA seq
456 aa
AA seq
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MSSFAPASGKSDLAEAGSLLTKYPLEVKKIPYKPDAKVDDVLCFRHYNESEVVMGKPMSD
WLRFSVCYWHTFRGTGADPFGFPTLVRPWDDGTDSIENAERRMRVAFDFMSKLGVKYWTF
HDRDIAPEGVTLSETNANLDRLAELASQLQGETGIKLLWNTCNLFAHPRYSNGAATNADA
HVVAYAAAQVKKSLEIGKKLGAENFVFWGGREGYHTLLNTNVREELDNLANFFKMVVAYK
KKIGFTGQFLIEPKPKEPSKHQYDYDAMTVIAFLKTYDLDKDFKLNIEPNHTTLAGHCHE
HDVVMASAYNMLGSVDSNTGSPDLGWDTDQFPMDVKNATMIMQTVLEQGGLAPGGLNFDC
KVRRESTDVIDMMIAHVGAMDCFAKALKIAAKIREDGVLGKMKKERYASFGSGLGLKIKT
GTATLEECDSFIQENGEPAKLSGKQEMFEAVLNRYF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtttgctccagcatctggaaagagcgatttggcggaagctggaagcttattg
acgaagtatccgctggaagtcaagaaaatcccgtacaagcctgatgccaaagtagacgat
gttttgtgcttccgacattacaacgaatcagaagtcgtcatggggaaaccgatgagcgat
tggcttcgtttctcggtttgctactggcacacgtttaggggaacaggggcagatccattc
ggattccctacattggtacgaccatgggatgatgggacagacagcattgagaatgcagaa
cgacgtatgagagtcgcgtttgatttcatgtcgaaactcggtgtcaagtactggaccttc
cacgaccgagatatagcaccagaaggggtgactctttctgaaacaaatgcaaatcttgac
cgtttagcagaattagccagtcagttacaaggcgagactggtattaaattgttgtggaat
acgtgcaatttatttgcacatcctaggtacagcaacggtgcagcaaccaatgccgacgca
cacgtggttgcatacgccgccgctcaggtgaaaaagtcacttgagatcggcaagaagttg
ggtgccgaaaactttgtgttttggggtggcagggaaggttatcatacattgctaaacacg
aatgttagagaggaacttgacaacttagcgaacttctttaaaatggtcgtcgcttataag
aaaaagatcggatttactggccaattcctaattgaaccaaagccaaaagagccgtcaaaa
caccaatatgattacgatgcaatgacagtgattgcgtttctgaaaacctacgatctggac
aaagattttaaattaaacatcgagccgaaccacaccacgcttgctggccactgccatgaa
cacgacgttgtcatggcgtctgcatacaacatgcttgggtctgtggattcgaacacagga
tcccctgaccttggctgggacacggaccagtttccaatggacgtaaagaatgcgaccatg
attatgcagacagtgttagagcaaggtggtctcgctcccggtggtttaaactttgattgc
aaagtgagacgcgaatcaaccgatgttatcgacatgatgatcgcccatgttggagcaatg
gactgctttgccaaagctttaaagatagctgccaaaatacgtgaagacggggtgcttggg
aagatgaaaaaggaaaggtacgcgagctttggcagcggacttggattgaaaatcaaaaca
ggaactgcaacactggaggaatgtgacagctttattcaagaaaatggggagccagccaag
ttgtctggaaagcaagaaatgtttgaagcagttttaaaccgatatttttag
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