Ciona intestinalis (yellow sea squirt): 100179828
Help
Entry
100179828 CDS
T01056
Name
(RefSeq) fibulin-2 isoform X2
KO
K17307
fibulin 1/2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100179828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100179828
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100179828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF_3
FIBL-2
FXa_inhibition
EGF
Fibulin_C
hEGF
Rad50_zn_hook
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
100179828
NCBI-ProteinID:
XP_009857426
LinkDB
All DBs
Position
1:complement(6052350..6072658)
Genome browser
AA seq
1564 aa
AA seq
DB search
MKLAVSFIVALNSLTLVSCFSYHSRLANARNQRLPNPRQIYENQESMLNRGRRGGVRDPT
PFPAYPYGGSQPRQHIDSEPNQPYIPNTFNDQAQQSHSSSDSANVGNGAPIQPADSSSAS
VDSANTASEHSVPCDKTKCPPLRNCINETSSETNCCPTCDRSGCQCEGYQYYDCLLNGFV
GGLVPEGESYSVDDGSTMCSCPMGGGMIVCSFQVSGFNSHGRTPPKVACPKPRPFCIETY
TRPSDGCEECLAVGCVGEDGHKYQAGVNFDRPPCTVCYCPPEGGDILCATDHVCQERMDQ
RANPPQTSLALEATQRVMRDPIGNEAQLNQQANIGDQSSFTKGSIIADDGYDTRFLQSDW
NKFGSSDLYQSKGDTGGVGSRNTGSMVAPPLADTPDASGTTANAAAGNQRNFGGSQSTSE
GGDSSQESSYLPYNPGSFAAQSQPLVPPGSVYPNYGFKQQYSPYNSQYPPYPYQQYHGYP
QGPSNANNLPTNSENTENEGEQDTNNDATNHQADNYRYGHESSDVSDQTGANTASDGTGN
GADNSRYSPYPSNQQYQPPPGYGLNYLGYHGNTAVKTGSTGTEGQTPEDGSDLTEVRPDD
EQSRLNGYLGYPQSYLNPQYGNGRSPEQTGDTSQTSDGLNSRLPSNPAFPHYAQYPSYLG
QPYRAAAGDKLTPDNEGLSNTGIGNQNFQSLYPSSHGTGPVDSNAVGGNSQNAQPNDGLS
VSDSYGGFGQRNPTQNLGLNFPLPPYHSAGSQGTDYYGNTENSDQTRNDDTNEANPDIQL
PPLRNVRSGQVVDSQAFIDQPETTTTSTTTTSTQPTTTTKTTTTPTTTTTPTTTTTPTTT
TTPATTTTTTTTPTTTTTTVTPTTRSTTTATIHHRHKIHRIHGVDRNVHNNSESFENVLT
ACCYQGKQFALSHDSCHGIPVTVTSYTQICAVAQEKCCLEAEEQETCNRGVATARSMAVC
DAPTSIRGQCEQDGFKSCCDCCALGLKAYGLSLSCSMEILGEPCNSAYSECCRTGPLTTQ
PGDTTETSTSTAKSARLNTTPATEFTGPRCATSNVCDHTCTDTSTGIQCSCREGYALEDD
SVTCSDINECVLATHSCVEGQICFNTLGSFTCQRLISCGTGYELTDRNTCDDIDECQLNI
DNCGDKLNCINIRGSFRCVAKSCDAGYFTDAVGGCIDIDECRSGDYICPSGTHCRNTHGS
YVCDCPDGYVLSSDQQSCEDIDECILGAHECADGETCVNTEGSFNCIQRPSLTCTAGYEI
SDDGESCIDVNECDRGTHTCSSGSTCINEEGSFRCQDPIICTPGTRPSSNQRSCIDIDEC
EDPLIHQCGEGARCVNVPGSFRCECNRGYRTTFQGSRTRCQDINECALAAGERCMYRCRN
SPGSYSCVCPSGYNLERFDGTCTDIDECNTNQHNCSRSETCFNTRGGFKCVEITCPAHYA
RLSNRQSRVKCIRKTCNPITCPQVSYLHIHVMLPSMYRLRHSETLLRLFMSRQASAIVVR
LVRGNEAGKFGIQNYGNRATLDLEHPIAGPWSTVLYLQASETSLGGGKELWMAVAYVYVS
EYSF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagctgtaagttttattgtggcactaaacagcttgactctggtgtcatgcttc
tcttaccacagtcgtcttgctaatgcacgaaaccagagattgccaaatccacgtcaaata
tacgaaaatcaagaaagtatgctgaaccgtggtcggaggggcggcgttagggatcccaca
ccctttccagcatacccgtacggtggctcccaaccccggcagcatattgacagcgaacca
aaccaaccctacattccaaacacgtttaatgatcaagcccagcaaagtcacagctcttca
gacagtgcaaacgtcggcaacggcgctccaattcagcctgccgactcatcgtctgcttcg
gtcgattcggcaaacacagcgtcggagcacagtgtcccatgcgataaaaccaagtgcccg
ccactaagaaattgcatcaacgaaacgtcatcagaaaccaactgctgcccaacatgtgat
cgttcgggttgtcagtgtgaaggctaccaatactacgactgtctcctcaatgggtttgta
ggcggactcgtcccagaaggagagtcgtattctgtcgacgatggaagcactatgtgcagt
tgtcccatgggtggtggcatgatagtttgcagctttcaagtgagtggtttcaacagccat
gggcgaacccctcctaaagtagcatgtccgaaaccgagacctttctgtattgaaacttac
acgaggccgtctgacggttgtgaagagtgtttagcggtcggttgcgttggggaggatggc
cataaataccaagctggcgtaaactttgatcgaccaccatgtactgtttgttactgcccg
cccgaaggtggcgatatcctgtgtgcaacggatcatgtttgccaagaacgtatggatcag
cgtgcaaatcccccgcaaacatcattggcattagaggccacccaaagagtcatgcgagat
cccatcggtaacgaggctcagttgaaccaacaagctaacatcggcgaccagtcgtcgttc
accaaaggttcaataattgccgacgatggttacgatactcgcttcttgcagtccgactgg
aacaagtttgggtcttcagatttgtatcagtctaaaggtgacactggaggcgtcggttcc
cgtaatactggatccatggtcgccccaccgttagctgacacacctgatgcaagcggcacg
actgcaaatgctgctgccgggaatcaacgcaattttggtggatcgcagtctacttcggaa
ggaggagattcgtcccaggagtcaagctatcttccctataatccaggttcatttgcagcc
caaagtcaacctctcgtaccccccggatcagtatatccaaactatggttttaaacagcaa
tactcgccgtacaactctcagtacccaccatacccttaccagcagtaccatggctaccca
cagggcccttcaaatgcaaacaatttaccaaccaatagcgaaaatacagaaaacgaaggc
gagcaggacacaaataacgatgccacgaaccaccaagctgataactatcgatacggacat
gaatcctctgacgtttcagatcaaactggtgcaaacacagcatctgatggcaccggcaac
ggtgctgacaactctcgatattcaccctacccttcaaaccagcaatatcaaccacctcca
ggttatggtctcaactaccttggctaccacggcaacactgcagttaaaactggcagcact
ggtacagagggtcaaacacctgaagacggctccgatctcactgaagtgaggccagatgac
gaacagtcgcgtttgaacggctatctcggttaccctcaatcgtatttgaacccgcaatat
gggaacgggcgatccccagagcaaacgggcgacacaagtcaaacatcagatggtttaaat
tcaagattgccttcaaacccagcgttcccacattacgcacaatacccaagctaccttggc
caaccataccgtgctgctgccggagataaacttaccccagacaacgaaggcctttctaac
accggcattggtaatcagaatttccaaagcctctacccatcttcgcatggcacgggacct
gtcgattcaaacgcagttggtgggaattcccaaaacgcccaacccaacgatggcctcagt
gtgagcgacagttatggaggattcggacaacgaaatccaacacaaaacctgggcttgaac
tttccgttaccgccttaccatagtgccggatcccaggggacggactactatggaaacaca
gagaactcggatcaaacccgcaacgatgacaccaacgaagcgaaccctgacatacaactt
ccacctttgagaaatgtgcgttccggtcaagtggttgattcgcaagcttttattgatcaa
cctgagaccacgacaacgtcaaccacaacgaccagcacccaaccaaccaccacaacaaaa
actacaacgacaccaactacaacaacaacaccaactacaacgacaacaccaactacaaca
actacacctgcaacaacaacaacaactacaacgactcccaccaccactacaacgaccgta
acacccacaactcgcagcacaacaacagccaccatccaccaccgacataaaatccatcgc
attcatggcgttgacagaaacgtacacaataactcagaaagcttcgaaaatgttcttacc
gcctgctgttaccaaggaaagcagtttgcgctaagtcatgacagctgtcatggcattcca
gtgaccgtaacttcctacacccaaatctgcgctgtggctcaggagaaatgctgccttgag
gcggaagaacaagaaacctgcaaccgcggagttgcgaccgctcggagcatggcagtatgt
gacgcccctacatcaatccgcggtcaatgcgaacaagacggtttcaaatcctgctgcgat
tgctgtgctcttgggttgaaggcttatggtttatccctcagctgcagcatggagatcctt
ggcgaaccgtgcaacagtgcttactcggaatgctgcaggacaggcccccttaccacccaa
ccaggagatacaactgagacgtcaacttcaactgcgaagtctgcgcgtctcaacacgact
ccggctacagagttcacgggaccgcgatgcgccaccagcaacgtatgcgaccacacttgc
actgataccagcactggcatccagtgttcctgtagggaaggctacgcccttgaagacgat
agtgtgacttgctcagatatcaacgaatgcgtgctagcgacccactcctgtgttgaaggc
cagatttgcttcaacacgctcggtagctttacctgtcagcgactcataagctgtggtact
ggatacgagctcaccgaccgcaacacgtgcgacgatattgacgaatgccagctaaacatc
gataattgcggggacaagctcaactgcatcaacatacgaggctcattccgatgtgtagcc
aagtcttgcgacgctggctatttcaccgacgcggtcggtggttgcatagatattgatgaa
tgtcgatccggagactatatttgcccctctgggacgcactgtcggaatacacacgggtcg
tacgtatgcgattgccccgatggttatgtactaagttcagatcaacagtcttgtgaagac
atcgacgaatgtatcttgggagctcacgaatgcgctgacggtgagacatgcgtcaataca
gagggaagctttaattgcatccaacgtccatcattgacttgcacggctggttatgagatt
agtgacgacggcgagtcgtgcatagatgtcaacgagtgcgaccgcggtacacatacttgt
tccagcggttcaacttgcatcaacgaggaaggcagcttcagatgccaagatccaattata
tgcacacctggaactcgcccgagcagcaatcaacgctcgtgtattgatatcgatgaatgc
gaggaccctttgattcatcagtgtggcgagggcgctcggtgtgtcaatgtacctggatcg
ttcagatgcgagtgcaaccgtggctacaggacaaccttccagggtagtcgcaccagatgt
caagatattaacgaatgcgcacttgcggccggagagagatgcatgtacaggtgccgcaat
tcaccaggaagctattcgtgtgtttgcccgagtggttataatttggaacgattcgacgga
acttgcacagatattgatgagtgtaatactaatcaacacaactgcagtcgctcagagact
tgctttaacacaagaggaggcttcaagtgtgttgaaatcacctgccctgcgcattacgcc
agactttcgaaccgccagtctagggtgaaatgcatcagaaaaacttgcaacccgataaca
tgtccccaagtaagttacctccatatacacgtgatgctgccgtctatgtacagacttcgc
cattcggaaacactccttcgtttgttcatgagccgtcaggcatccgctattgttgtgcgt
ctagtgcgtggaaacgaagctgggaagtttggcattcaaaactatggcaaccgagcaaca
ttagatttggagcacccgatcgctggaccttggtccacagtattatatttgcaagcgagc
gagacgtcgttaggtggcggcaaggaactatggatggccgtggcatatgtttatgtctcg
gagtacagtttctaa
DBGET
integrated database retrieval system
