Ciona intestinalis (yellow sea squirt): 100179858
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Entry
100179858 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100179858
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100179858
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100179858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
DUF6274
Baculo_IE-1
zf-WRNIP1_ubi
UPF0239
Motif
Other DBs
NCBI-GeneID:
100179858
NCBI-ProteinID:
XP_002130685
Ensembl:
ENSCING00000013156
UniProt:
F6YFI7
LinkDB
All DBs
Position
8:5026442..5031853
Genome browser
AA seq
275 aa
AA seq
DB search
MENPESAEISVTGTYVEGVGDEVVVAFFTFLTIFCGIGSLVYKWLKLSNLTAIHPDSQEN
VNATRSQLGINSDGSTATSDISDGNERDDLLAGEGHRSFYSDQRCPICLQDARCSVETNC
GHLFCGQCIITYWRYGNWLGAVQCPVCRQMVSLLMRNFQRNSDNEETREVESNINEYNRR
FSGQPRPLLDYLWDLPALLRHLWREFFSVGGLVMMFRARIFLCFVAVLLYVLSPLDILPE
AVLGVIGFIDDIFIFLLVLVYVTIIYRQIVAERVG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcccgagagtgcagagatcagtgtaactggtacttatgttgaaggtgttgga
gatgaagtagttgtcgcattttttacatttcttacaattttctgcggcattggctcacta
gtgtacaagtggttaaaactcagcaatctgacagccattcatccagacagccaggaaaat
gtgaatgccacgagaagccagttaggaatcaattctgatggttcaacggccaccagtgat
ataagtgatggaaatgaaagagatgatttgttagctggtgagggccacagaagtttctac
agtgatcaaaggtgtccgatatgcttacaagatgcaaggtgttctgtggaaactaactgt
ggtcacttattttgtggccagtgtattataacttactggaggtatggcaactggcttggt
gcagttcagtgtcctgtatgccgtcaaatggtcagcttgctcatgaggaacttccaacgt
aacagtgacaacgaagagacaagagaagtagagtcaaatataaatgaatacaaccgacgt
ttttcaggacaaccaagaccgctactggattacctttgggacctgcctgcacttttgcga
catttatggagagagtttttctccgtgggtggattagtcatgatgtttcgagcccgtatt
ttcctttgttttgttgccgtattactgtacgtcttatccccattagatattctgcctgag
gcggtgttgggggtcattggatttattgatgacatttttatttttctgcttgtgttagtc
tatgttactattatctatcggcagatagtagcagaacgggtgggataa
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