Ciona intestinalis (yellow sea squirt): 100179888
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Entry
100179888 CDS
T01056
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100179888
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100179888
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GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
KH_1
KH_KRR1_2nd
STAR_dimer
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
100179888
NCBI-ProteinID:
XP_018670868
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Position
1:8220723..8231148
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AA seq
356 aa
AA seq
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MTDLPVDSKYLPELMAEKDSIDPSFVHAVRLISSEIEKIKNPPPPAKPSNNSNDPKMFNI
YDDKYPKVECNIRIPVNEFPRVNFIGRLIGPGGSTLKGIQEVTNTRIAILGKGSLRDKKK
AEELANSSDVKYNHLKYPLHVRISAIGSVDQAYMSIGRACSEVSKLLMVEDEDEYIAAGA
AAMLQARGGAVGVGGGMRGAGRGAPRGVRGGGRGAPRGSPSGSRGSSRGGRGARGGTRGG
MRGAARGAVASRFPKAQIQAADSYVNQALEYAEAGYDVYSEYAEAAAYDPYGQATEEAYN
ESYADGAYGVTDSYDAYTFADYESYGNGAESYVPAKPAYRGKIRGGARGRGAGKPY
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttaccagttgattcgaaatatttgcccgaattaatggccgagaaagatagc
attgacccttcgtttgttcatgctgttcgtttaatatcttctgaaattgaaaagattaaa
aacccacccccacctgccaaaccatcaaacaattccaatgacccgaaaatgttcaatatt
tacgacgacaaataccccaaagtggaatgcaatattcgaatccctgttaacgagtttcct
cgtgtcaattttatcgggcgattaatcggacctgggggttcaacgttaaagggaatccag
gaagtcacaaatactagaatcgcgattctaggcaaagggtcattacgggataagaaaaag
gctgaagaattagcaaacagcagcgatgtaaaatacaaccatctaaaatatcctctccat
gtaaggattagtgcaataggatctgttgatcaggcttacatgagcatcgggcgagcatgt
tccgaggtttccaaactcctcatggtagaagatgaggatgaatacatcgcggctggagca
gcagccatgttgcaagcaagaggaggagcagttggagttggaggagggatgcgcggagca
ggaagaggagctccacgtggtgttcgaggtggaggaagaggggctcctcgtggatcacca
tctggaagtagaggatcatcaaggggtggaagaggagcacggggtggaacacgaggtggc
atgagaggtgcagccaggggtgcggtagcttcaagatttccaaaggcacaaattcaagct
gctgattcttatgttaatcaggcattagaatacgcagaggctggttatgacgtatacagt
gaatatgctgaagctgctgcttatgatccgtatggtcaagcaactgaagaagcatataat
gaatcatatgctgatggtgcgtatggtgtaacagattcctacgatgcatatacctttgct
gattatgaatcttatggaaatggggcagagtcgtacgtgccagccaaaccagcataccgg
ggtaaaatacgggggggtgctcgtggtagaggggcaggaaagccatattga
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