Ciona intestinalis (yellow sea squirt): 100179944 Help Entry 100179944         CDS       T01056                                  Name (RefSeq) integrin alpha-L isoform X1   KO K06587   integrin alpha 11 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04512   ECM-receptor interaction cin04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cin00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100179944  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100179944  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:cin04515]     100179944 Cell adhesion molecules [BR:cin04515]  Integrins   Integrin alpha subunits    100179944 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA FG-GAP VWA_2 Integrin_A_Ig_3 Integrin_A_Ig_1 FG-GAP_3 Integrin_A_Ig_2 Motif Other DBs NCBI-GeneID:  100179944 NCBI-ProteinID:  XP_026694497 LinkDB All DBs Position Unknown AA seq 1803 aa AA seqDB search MKTSHKMKKGNMFEFSVTCFVFLYSLHVYGFNLDEEVVQRDFSGFGVRQSSIYFGYTVSL LSTSNHAQELFVGSPFDKIQTINDKQLAYRERSTGNLYRCGDLNLDNGVTFVHRKNCSIV STSQETSVAGNPLQALTMSMVGASWDEGQSNLVVCNNMWTRNCKDAYKTEGVCYVTNTTS ELNVLNRPKWKQLSPCKRECYRKMIDFMFVVDGSRSVGNESFEVVKHWIQQVTSGFDISS SVQVGVVQYSTYQYRKVVQPFIKTEIRLGEYKDHILFDAAVDKIKYHDRSTFTAYAIRKT VNEDFKGNMSRYPDSRRVMVLLTDGQSTDKEDLSSAAAEAKQEGVETFAVGVGSKIILSE LVLIAGSPDKVITVNDFNELLGIVNQLQGDIQLLDGTSNNETNNDLTQCQAGTSSTLSKN EVSSFPLLFKLSLRRLVNDGFKPENQIHIFHRDNLHCCFVARSVMGRRLLLWPAFGFVCE VLLVVSGFNIEASGKTDHRFTRAIEANTFGETHQSFKGTSYFGYQLFLQVINDGTEDTIQ LAAGAPTEEVKTYKDTDKEDGTAIIEPIPSLRAALTSTSAMGALYYCENMQKNFKNISGT RYHNCSMRAGVQRDLSGFEISDRDALGISLTHEPFYSPDGYSLETKNTLVTCAHLRIHDC GAAYKAEGACYVSESTPGRGDSNMITKWHKRVPCRDSCFERDIDLMFVVDGSYSVGNESF DKVKVWIKEVTNGFEIKQQVQVGVVQYSYFYPNREDQPYMKTEISLGQFKNKTLFDQAVD AIYYQQYTTYTAHAINKTVKEDFNSGTSRYPSARRVMILLTDGNADDATQLPGATAYAEA QGVESFAVGVGQYKLKQLELIAGSKDRIITVDNFDDLSSVVSQLQRGIQIMEGSTAPGVT NELMQCQAGFSTSFDKSGRLILGAPGAYDWAGTITKYDSASDTTADIPTFTQVQGVLPNR TKESYLGYSVSTGLYDGSGKQFVASGAPRYMLEGGVVLYEPQVGSSNFTNSQTIQAYGSY KQLGSYFGATLLSADINGDGKDDLLVGAPLYIGDNYDEGRVFVYLSQASNSIQAWASPGF VPKVFSGMKDVGGRFGSAISSAGDLNNDGFKDVIIGAPLADNGAGVVYVYHGSSDFGTAN SLQYKQRIAATALSGTNLQYFGQSLQGGVDLDGNRYPDVAVGAPRSDTVVIFRTRPVAKF NTTLTFNKLNVPIFECFRREFRDCLQLRACIGLSGKGLEKSIKTLFSVVLDSSVTKKRVE FRNQANQTANGYTSRDIVLNITTPAAPVCFNYPVYVKTSIEDYSEPIVATMTYSLSSSHL AVPLSSISDPFIPKVKTASTSFETDCGVDQTCSYDLSIAGTQYIIPRPTPDLSNGGTTLV ISRGSDTQRIVAKLNLTNTGEPAFDPQVTLSFTSALGWGGTQNVQSSNPDYVQCIQSQDP TTVGSTKSVVLSYKYNAFLGSIMQRGQWCYFELKLSYNQLTNIGNIPRVLVNILADTKKF GLSNDTNPSDNSFQSTTPVIYVAAADVTSQVNLQNIPFNFTDTNVTITSVEEIADRDIPI DFEIKGKGHAVVPESTITLHYPNKIGDLMHLFYLYKVDCLTTGGNARCVCDTSIVNPYQL SLDPPNVNITTPNVTILPNPDNLSAGTYDCSGPSLPGYCQSLKCNISNLAQDDVVKFSAK FKLWSKTLRQQNKTQIDFVTTFLFSANKSAYLVDAQGNPLTDIIQTITTPANHWKAPEFV TTTDYLWVYILAAIGGLLLLLLIIGIMYKTGFFKSKYAEMKQEALEWNEANPNGNVEEHM AAD NT seq 5412 nt NT seq  +upstreamnt  +downstreamnt atgaaaacttcccacaaaatgaaaaaaggaaatatgtttgagttttcagtgacgtgtttt gtgtttttgtattcacttcatgtatatgggtttaacttagatgaggaagtagttcaaaga gatttctcaggtttcggtgtgagacaatcgtccatttatttcggctacaccgtttctcta cttagcacaagcaaccatgcacaggagttgttcgtcggctctccctttgataaaatacaa accattaatgataaacaacttgcttatcgtgaaaggtcgaccgggaatctctacagatgc ggtgatttaaatcttgataacggagtcacttttgttcatcgaaagaattgttccatcgta tccacctcccaagaaacatctgttgctgggaatccacttcaagcactcactatgtcgatg gtgggggcgagttgggacgaaggtcaaagtaatctcgttgtttgcaataatatgtggaca aggaactgtaaagatgcctacaagacagaaggggtttgttacgtcacaaatacaacttcg gagctcaacgtccttaatcgaccaaaatggaaacaattatcgccatgtaaacgagaatgt tacaggaaaatgatcgactttatgtttgtggttgatggctcccgctctgtcgggaacgaa agttttgaagtcgtcaaacattggatacaacaagtgacaagtggatttgatatttcaagc tcggtgcaagtcggagttgttcaatattccacttaccaataccggaaagttgtccaacct tttataaaaacggaaatccgtttgggcgaatacaaagaccacatattgtttgatgcagct gtggataaaataaaataccacgatcggagtacgttcactgcttatgctataaggaaaact gtcaacgaagatttcaaaggaaacatgagcaggtatcctgattcccgacgagttatggtt ctccttacagacggacagagtactgacaaagaagacttgtcgtctgctgcagcagaagcc aagcaagaaggagtggaaacttttgctgtgggggttgggtctaagattatcctaagtgaa cttgtcttgatagctggttcaccagataaagttattactgtcaatgactttaatgaattg ctaggaatagtgaaccaactacaaggagatatacaattactagacggtacatcaaacaat gaaaccaacaacgatctcacacaatgtcaagctggtacatcatcaacattaagtaaaaat gaagtttcgtcatttcctcttctattcaaactttctctccggcgtttggtaaacgatggt ttcaaacctgaaaatcaaattcatattttccacagggataacttgcattgctgttttgta gcaaggtcagtaatgggcagaaggttgttattatggccagcgtttggtttcgtgtgtgaa gtattgttagtagttagtggatttaacattgaagcgagtggtaaaactgaccatcgtttt acgcgagcaattgaagccaatacatttggtgagactcatcaaagttttaaaggaacttca tatttcggttaccagttgtttctgcaagtaattaacgacggaacagaagacacgatacag ttagctgcaggtgccccaacagaagaggtcaaaacttacaaagacacagacaaggaagat ggaactgcaataatcgaaccaataccgtcactaagagctgctctgacatcaacttcggcc atgggcgcgctatattactgtgaaaacatgcagaaaaactttaagaatatttctggtacg cgttatcacaactgtagtatgcgtgcgggtgttcaacgagatctaagcgggtttgaaatc agtgatagggatgccttgggcatttcgcttacacatgaaccattttactcaccggatggt tattccctcgaaaccaagaatacacttgttacttgtgcccacttgcgtatccacgactgt ggtgctgcatacaaagctgaaggtgcttgttatgtttcggaatcaactcctggtcgtggc gattcaaacatgatcactaagtggcacaagagggtcccatgcagagacagttgttttgaa cgagacatagatctaatgtttgtcgtcgatggttcttactcggtcggaaacgaaagtttt gacaaagtaaaagtctggattaaagaagtgacaaacggttttgaaatcaaacagcaagtg caagttggagtggtccaatactcttatttttatccgaatcgtgaggatcagccgtacatg aaaactgaaataagtttgggtcaatttaaaaacaaaactctcttcgaccaagccgtggac gcaatttactaccagcaatacacaacgtacacagctcacgctataaacaaaacagttaaa gaagatttcaattcgggcacgagccgttaccccagtgctcgaagagtaatgattctgcta acagacggaaacgcagacgatgccacgcagcttcctggagctacagcatatgcagaagca caaggtgttgaatcgtttgctgtgggtgttggacaatataagttaaaacaacttgagtta attgctggttcaaaggatcgaatcattacagttgataattttgatgacctatccagtgtg gtgtctcagttacaacgtgggattcaaattatggaaggttcgacggctccaggtgttact aacgagttaatgcaatgccaagccggtttttccacaagttttgataagtcaggtcgtttg atacttggtgcaccaggtgcgtacgactgggcaggaaccatcaccaagtacgactctgca tcagacacaacagcggatattccaacattcactcaagtacaaggtgtcttaccaaaccga acgaaggaatcttatttaggatattctgtgtctactggtttgtacgatggcagcggcaaa cagtttgtggcaagtggtgcaccccgatatatgttggaaggaggggttgttttgtatgaa ccacaagtcggcagcagcaactttaccaactctcaaactattcaagcatacggtagctac aaacaacttggaagttattttggcgcaacattgctctctgctgacatcaatggtgatgga aaagatgatttacttgttggggctcctctatatatcggtgataattatgatgaaggaaga gtctttgtttatctctctcaagcttcaaactccatacaggcttgggcaagtccagggttc gtaccaaaagtattttccggaatgaaagacgtgggtggtcgattcggttcagcgatttca tcggcaggagatcttaataatgatggttttaaagatgtcataattggtgcaccactcgcg gacaatggagcaggggttgtgtatgtttaccacggaagtagtgacttcggcacagctaac agtctccaatacaaacagagaattgcagccactgcattgtctggaacaaatcttcaatac tttggtcaatctcttcaaggtggtgtagatttagatggaaaccgttaccctgatgttgca gtgggggctccaagaagtgacactgttgtcatatttagaacacgaccggttgccaagttt aatacaacacttaccttcaacaagttgaatgttccgatatttgaatgttttcggagagaa tttcgtgactgcttgcaacttcgtgcatgtattggactttctggaaaaggacttgaaaaa agcataaaaactctcttctctgttgtattggacagttcagtcactaaaaagagagtggaa ttcagaaatcaggccaaccaaactgctaatggttacacaagtcgagatattgttttgaac attactactcctgctgcccctgtctgttttaattatcctgtctatgttaaaacaagcatt gaagattattctgaacctatagttgctacaatgacttattcattatcaagcagccatctg gcagttcctctttcttcaataagtgacccgtttatcccaaaagtcaaaactgcatcgaca agttttgaaaccgattgtggagttgatcaaacctgttcatatgatttgtccattgctgga acgcaatatattattcctagaccaacccctgacttaagcaatggaggaactaccttggtt atatcgcgtggttcagacacacaacggatagttgccaagcttaaccttacaaataccggt gaacctgcctttgaccctcaagttactcttagttttacatcagcacttggatggggaggg actcagaatgtacaaagttccaatccagactacgttcaatgtattcaaagtcaagaccca acaacagttggttcaaccaagtcagttgtgttaagttacaaatataatgcattccttgga agtattatgcaaagaggacagtggtgttattttgagttgaagctttcatacaatcaactg actaacattggaaatattccccgggttttagtcaatatactagctgatacaaagaaattt ggtttaagcaatgatacaaatccatctgacaacagttttcaatcaaccacaccagtcatc tatgttgcagcagccgatgttaccagccaagttaatcttcaaaacattccattcaacttc accgatacaaatgtaactattacatcagttgaagaaattgctgatcgagatattcccatt gattttgagatcaaaggaaagggacatgcagttgttcctgaatcgactataaccctccac taccccaacaaaataggagatctcatgcatttgttttatctgtacaaagtagattgtctt acaactgggggcaatgctcgatgtgtgtgcgatacttcaatagtcaacccataccaactc tcacttgacccacccaatgttaacatcaccactcctaatgttaccatactacctaatcca gataatttgagtgctggcacttacgactgcagtggtccatcactaccaggttattgtcaa agtttgaaatgcaacatttccaaccttgctcaagatgatgtcgtgaaattttcagcgaaa tttaaactttggtcaaaaactttaaggcaacagaacaagacgcagattgactttgtaaca acgtttctgttcagtgcaaacaaatcagcttaccttgtcgatgcacaaggaaacccactg acggatattattcaaactatcaccacaccagccaaccattggaaggcacctgaatttgtt acaacaactgattatctatgggtttatattcttgctgctattggtggcttgttgttgtta cttcttattattggaattatgtacaagactggattcttcaagagtaaatatgcggagatg aaacaagaagccttggaatggaacgaggcaaacccgaacggcaatgttgaggagcatatg gctgcagattga

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