Ciona intestinalis (yellow sea squirt): 100179960
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Entry
100179960 CDS
T01056
Name
(RefSeq) DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cin03032
]
100179960
03400 DNA repair and recombination proteins [BR:
cin03400
]
100179960
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100179960
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
100179960
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100179960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
WHD_MCM8
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
AAA
AAA_22
RuvB_N
AAA_29
NACHT
AAA_7
DUF3877
Motif
Other DBs
NCBI-GeneID:
100179960
NCBI-ProteinID:
XP_002129364
Ensembl:
ENSCING00000004980
LinkDB
All DBs
Position
4:3527695..3541454
Genome browser
AA seq
812 aa
AA seq
DB search
MSNSNKTGPSKSNKKKNNWFKHRNFTNSPVLVSRAQQINVGPEATAGGFCPYKAWNHYFP
LDEYSPTSDIVESINVFDKFVKDYFTTHDMNEIATRACIVIDCKNLAAHVSVKTKYPNFV
ANLRETPERIINCIGLATHQYIIRQYQQLASKEQTRTQMLEALADVPVIRARLYNFEPLT
ALKHLKAKTFGQFVAIRGTLVKVSHVKPLCTTMAFRCTMCEQLQAILLIDNKYSTPTKCV
SSSCRGRSFEPLRSHPLTEITDFQVVKLQESVSEEQRETGRMPRTVEVELSRDLADTASP
GDVVTITGVVKVKKSEDGVHFSNKAKNKCMFLLHIEGNHVSNSRGNTLTDCRGNSADELL
DFSARDLAGIEEIRKQDDIFSLLVASLCPTIFGQDMVKAGMLLCLFGGNQNSDEDRIPVR
GNSHILLVGDPGLGKSQLLQAVSRLVPRGVYICGNASSNSGLTVTLTRDSGTGDTGLEAG
ALVLADQGVCCIDEFDKMTNQHQALLEAMEQQNISIAKAGIVCSMPARCSIIAAANPVGG
HYNKSKTVSENLKMGGALLSRFDLVYILLDTPDEKRDKLLSDHVMAMHTGRKKKESLVKQ
LAAASSRENISMGLLHDRLSKYARKDDCDPVPYSLLWKYIAYARKTMKQVNLSPEACQVL
KEFYLELRKKGYTADSTPITTRQLESLRRLTEARCKVEFREVASAEDAREVVEIMQHCLY
ETFADETNSLQFERSFHGTGVSKRGKVKKLIALLNREASYKSSNLFSTSDIRALAQKIGI
EATFVSEQIEVLNNQGFLIKTGSSMYKLQTMD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatagcaacaagactggcccatcaaagtctaacaagaagaaaaacaattggttt
aaacacagaaattttaccaactcgccagttcttgtttcacgtgcccaacaaataaatgtg
ggacctgaagctacagctggtggtttctgtccatacaaagcttggaatcattactttcct
ctggatgaatattcccctaccagtgatatagtagaaagcatcaatgtctttgataaattt
gtgaaagattattttacaactcatgacatgaatgaaattgctacaagagcctgtattgtt
atcgactgcaagaatttggcagctcatgtcagtgtgaaaacaaaatacccaaactttgtt
gcgaatctcagagaaactcctgaaagaatcataaactgcattggattggccacgcatcag
tatattattcgacaataccaacaacttgcaagcaaagagcaaacgagaactcagatgttg
gaagcattagctgatgtgccagttattcgagctcgactttacaactttgaaccactcact
gcattaaaacatctgaaagcaaaaacttttggtcaatttgttgcaatccgaggaactctg
gttaaagtcagccatgttaaaccgctatgcacaacaatggcattccgttgcacaatgtgt
gagcagctacaagcaattctgttaatcgacaacaaatattcaacaccaaccaaatgtgtg
tcgtcttcttgccgtggtcggtcgtttgaacctttaagatctcatccactcacggaaatt
actgactttcaagttgtaaaactgcaggaaagtgtatcagaagaacaaagggagacaggt
agaatgccacgaactgttgaagttgaattgagtcgagatttggcagacacagcttcccct
ggtgatgtggtgaccatcacaggtgtcgttaaagtaaagaaatcggaagatggagttcat
ttttccaataaagctaagaacaagtgcatgttcctacttcatattgaaggcaaccatgtc
agtaactctcgtggaaacactttaaccgattgtcggggtaactctgcggatgagttgttg
gatttcagtgctcgtgatctcgctggaattgaagaaataaggaaacaagatgacattttt
tctcttcttgttgcttcactctgcccaaccatatttgggcaagacatggtcaaagctgga
atgttattgtgtctctttggtggcaaccaaaactcagatgaagacaggataccagttcgt
ggaaactctcatatactcttggtcggagatccaggtcttgggaaaagtcaactcctgcaa
gcagttagtagattggttccacgtggagtttatatttgtgggaatgcttcatcaaacagt
gggctcactgtcactttaacgagagattcagggaccggggatacagggttggaggccggt
gcgttagtgctcgctgatcaaggtgtctgttgcattgatgagtttgataaaatgacaaac
caacatcaagcattattggaagcaatggagcaacagaacatcagcattgctaaggcaggg
atagtgtgtagcatgccagccaggtgttcgataatcgctgctgcaaaccctgttggtgga
cattacaataaatcaaagactgtttcggaaaacttaaagatgggaggagctttactctca
cggtttgatctcgtttacatcctccttgatactcctgatgaaaaacgagataagcttcta
tctgatcatgtcatggcaatgcatactggaagaaaaaagaaagaaagtttagtcaagcaa
cttgctgctgcttcatcaagagaaaacataagcatgggtttattgcatgataggttatct
aaatacgcacggaaggatgactgtgacccggtgccttattcgctattgtggaagtacatt
gcatatgcgagaaaaacaatgaaacaagtaaaccttagcccagaagcatgccaggtttta
aaagaattttatttggaacttcggaaaaaaggttatacagctgacagcactcctattact
acaaggcaactggaatcactgagaagattgaccgaagcaagatgcaaagtggagtttagg
gaagtcgcgagtgctgaggatgcacgcgaagtggtggagatcatgcaacattgcttgtat
gaaacatttgccgatgaaactaattctcttcaatttgaacgatccttccatggcactggt
gttagtaaaagaggaaaagttaaaaaattaatcgctctattaaatagggaagcaagttac
aagtcaagcaacctttttagcacaagtgatattcgtgcactagctcaaaaaattggcatt
gaagcaacttttgtttcggaacaaattgaagttttaaacaaccaaggattcctgatcaaa
actggatcttctatgtacaaattacaaacaatggattga
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