KEGG   Ciona intestinalis (yellow sea squirt): 100179970
Entry
100179970         CDS       T01056                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cin03036]
    100179970
   03400 DNA repair and recombination proteins [BR:cin03400]
    100179970
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100179970
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100179970
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_RFWD3 eIF2A Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 NBCH_WD40 Beta-prop_NUP159_NUP214 B-prop_COPA_B_2nd Beta-prop_DCAF12 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 100179970
NCBI-ProteinID: XP_002121169
Ensembl: ENSCING00000006781
UniProt: F6VEB2
LinkDB
Position
8:complement(1743434..1746952)
AA seq 337 aa
MTPTLDCVASLNDHGDRVWDVKWNPKGTLLATCGTDKTIRIWGKEGDKWVCKSILQDGHQ
RTIRKVGWSPCGNKLASASFDATICIWDKSSGQFESAATLEGHENEVKAVAWSQSGEYLA
TCSRDKSVWIWSVDDEEDDFECAGVLTVHTQDVKDIAWHPFEPIVASASYDDTIKLFKED
DGEWLSFATLSGHSSTVWSVSWSKDGRRLVSGSDDKTIKVWQKYEPGNMEGIATKGETPT
WKCVCTLSGYFNQPIYCVTWCHQTDMIAACSGDNSIIVFREDESSGDSDPIFSVVASTQQ
AHDQDVNAVSWNPTTPGLLASCSDDSCIKLWKIEIDG
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgactccgacgttagattgtgttgcatcgttaaacgatcacggggacagagtatgggac
gtgaagtggaatcctaaaggaacactgttggcgacttgtggcacagataaaaccatacgg
atatggggaaaagaaggtgataaatgggtttgcaaatcaattcttcaagatggtcatcaa
agaactatccgtaaagtaggttggtccccatgcggtaataaactagcttctgcaagcttc
gatgccactatttgtatctgggataaaagttccggacaatttgaatctgctgccacatta
gaaggtcatgaaaatgaagtaaaagcagtagcatggtcacaatctggagaatatttagct
acttgctcaagggataaatcagtctggatctggtcagttgatgacgaagaagacgatttt
gaatgcgcgggcgttcttactgttcatacacaagacgtaaaagacatagcatggcatcct
tttgaaccgattgttgcatctgccagttacgatgatacgataaaattgtttaaagaagat
gatggcgaatggctttcattcgccaccttgtccggtcattcgtctactgtatggtcagtt
tcgtggtcaaaggacggtaggcggttagtgtcaggttcagacgataaaacaataaaagtt
tggcaaaaatatgaacctggtaatatggaaggaattgcaactaaaggagaaactcctact
tggaaatgtgtgtgcaccttatctggctattttaatcaaccaatatactgtgtcacttgg
tgtcatcaaacagacatgattgcagcatgcagcggtgacaattctattatagtttttcgt
gaagatgagagctctggggattctgatcctatttttagtgttgttgcctcaactcagcaa
gcacatgatcaagatgttaacgctgtgtcatggaatccaaccacaccaggccttttagca
tcttgtagtgatgatagttgcattaaactgtggaaaatagaaattgacggatga

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