Ciona intestinalis (yellow sea squirt): 100179980
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Entry
100179980 CDS
T01056
Name
(RefSeq) ATP-binding cassette sub-family B member 9-like
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin02010
ABC transporters
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100179980
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100179980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179980
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100179980
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100179980
Transporters [BR:
cin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100179980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
100179980
NCBI-ProteinID:
XP_009860482
Ensembl:
ENSCING00000018443
LinkDB
All DBs
Position
12:2888657..2897934
Genome browser
AA seq
852 aa
AA seq
DB search
MVQSRTVLLLYPFLSLLDFFATAIILAHGNNWNLLLKSAQHYSFASSFVDFWIFPVIKTS
FIIGASIGILKNPEHGPKNCKKTEWLVVTVACVNLYFACIKMLVFSHDTSFVVGPNLSWF
WVLFAWSNLGALIFLIQWHFLSNLKLSPSRQINVEAPENEKQSLLGNSHEGYGSLANNGS
IINASTSNSSSNSSSTTSSPSKPQKDSDDKTFIELASRATIGKMMSYSLPDWPLLLLGSI
FLVGAAVGQIFLPLYVGRVISAIVQPDRQTQFTSIIFEMALIGIGVSICAGLRAGCLMYY
MQRLNIRIRNSLFKSILHQEIGFFDEVRTGDITSRLTSDTTTMSDTIGLNFNIFIRSMIK
GVGVCIFMFALSWRLSVITFMGLPMIFAVSKVYGSYYKKTQKQVQDRFAKANEVAQEVCS
SMQTVRSFANENGEIAQYKIRLLDVLKVQFKQAASYSVYVWCSQVFEQFLMVFTLWYGGQ
LLISGTLTSAHFIAFILYQEELGECFSEIGDVYTGMMQALGAAEKVFELIGRKPRLSLED
GTEQPTYIEGRISFKNVSFAYPSRPEQPVLENISFEVNPGEVVALVGPSGGGKSSCVKLM
QRFYEPTSGSVLLDGMSVSSFKHQFLHEQISLVGQEPVLYARSIKENIIYGLSSDHYTEQ
SVLDASKLANAHSFVIALPDSYQTETGEKGTQLSGGQKQRVAIARALVRNPKVLLLDEAT
SALDTESEYLVQEALERSKSHRTVLLIAHRLSTVERADRIVVIVKGKVEEVGSHNELMAK
KGTYYNLVYRQLHNVSQKTGDESSDKAVDNEGVTETLQPSRRTNSWIRHRSISRDSSSTT
SSSSVGSPVFGV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggtacaatcaagaactgtgctcttactatacccgttcttatcgttgttggacttcttt
gcaacagctatcatattagcacatggcaataactggaatctgttacttaaaagcgcacag
cattactcgtttgcatcttcgtttgtcgacttttggattttcccagttataaaaacttcc
tttataattggcgctagtattgggattttgaaaaatcctgaacatggtccaaaaaattgc
aaaaaaactgaatggctagtggtcactgttgcttgcgtcaatttgtattttgcgtgcatc
aaaatgctggtattttcccatgacacatcttttgttgttggcccaaacttatcttggttt
tgggtcttatttgcttggagcaatctgggtgctcttatttttctaatacagtggcatttc
ttgtctaatttaaaactctccccatcgaggcaaatcaatgttgaggcacctgaaaatgaa
aaacagagcttgctaggaaattcacatgaaggttatggcagccttgccaacaatgggtcc
attattaatgcttctaccagtaacagcagcagtaatagttctagcactacaagctctcca
agtaagccccaaaaggattcagatgacaagacttttattgaactagcaagcagagctaca
attggtaaaatgatgtcctacagtttaccagactggccacttcttctcctgggttcaatc
tttttggtgggcgcagctgtgggacaaatttttctcccattatatgttggacgagtcatt
tcagctattgtgcagcctgacagacaaacccaatttaccagtataatcttcgaaatggct
ctgattggaattggtgtctcgatctgtgcaggtctcagagcaggctgtttgatgtactac
atgcagcgtttgaatataaggataagaaactctctttttaaatcaattctgcatcaagaa
atcggattttttgatgaagtgcgaacaggtgacattacgtctcgtttaacatctgacaca
acaacaatgagtgacaccattggccttaactttaacatattcattcgaagcatgataaaa
ggtgttggtgtatgtattttcatgtttgcactgtcttggaggctctctgttatcaccttt
atgggcctaccaatgatttttgccgtttctaaagtgtatggaagctattacaagaaaact
caaaaacaagttcaagatagatttgcaaaagctaacgaagttgctcaagaagtttgctca
tccatgcagactgttaggagttttgcgaacgaaaacggagaaattgctcaatataaaata
cgactgcttgatgtattgaaagtccagttcaaacaagcagcatcatattccgtctatgtt
tggtgctcacaagtttttgagcaatttttaatggtgttcactctgtggtatggtggacag
ctgttgatttctggtactcttacatctgctcacttcattgcctttattctataccaggag
gaattaggagaatgtttcagcgaaattggggatgtatatactggtatgatgcaagcatta
ggagctgctgaaaaagtgtttgaactaattggaagaaaacctcgtttaagtctcgaagat
ggaacagaacaaccaacctatattgaaggccgtatctcatttaaaaacgtctcatttgca
tatccaagtaggccagaacaaccagtgttagagaacatttcatttgaggtgaaccctggt
gaagtagtggcactagtaggtcccagtggaggaggaaagtcatcatgtgtgaaactgatg
cagaggttttatgaaccaacatccggatcagttcttctggatgggatgagtgtcagctct
tttaaacatcaatttctgcatgaacaaatatctttagtggggcaagagccggttctgtac
gcacgatctatcaaagaaaatatcatatatggactgtcttctgaccactacacagaacag
agtgttttagatgcatctaagcttgcaaatgctcacagttttgtaatagccttgccagac
agttaccaaactgaaactggtgagaagggcacacagctttctggtgggcagaaacagaga
gtggcaatcgccagagctttagttagaaatccaaaagttcttttgcttgatgaagctaca
agtgctcttgatacagaaagcgaatatttagtgcaagaagctttggaaagaagtaagtca
cacagaacggtgttgcttatagctcacagactcagtacagttgaaagagctgatcgaata
gttgtgattgtaaagggcaaagttgaagaagtgggaagccataatgagcttatggctaaa
aaagggacttactataatcttgtatacagacaactacataacgtttctcaaaaaacgggt
gacgagtctagtgacaaggccgttgacaacgaaggcgtcactgaaacattacaaccctct
agacgcacaaatagttggatacgacaccgaagcatcagtcgtgattcttctagcactaca
tctagtagtagtgtagggtctccagtgtttggtgtctaa
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