Ciona intestinalis (yellow sea squirt): 100180005
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Entry
100180005 CDS
T01056
Name
(RefSeq) complement component C6-like isoform X2
KO
K03995
complement component 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
TSP1_spondin
TSP_1
Ldl_recept_a
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
100180005
NCBI-ProteinID:
XP_002126061
Ensembl:
ENSCING00000023259
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Position
10:complement(735907..743421)
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AA seq
562 aa
AA seq
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MKGIAILSIAVLFSITEARFRIRRRRNAPAPVHCAVSSWSAWSACSVSCAGGERSRSRRI
IRHPAHGGNGCPGLHQKGKCSQHRCPINCEWGEWGAWSSCSPCPPGGRSRSRNITTASMF
GGQACIGGEFNSDYNCLSEEDCPLFQCPDETFACADELTCIRPNLRCNGDDDCTDNSDEE
NCGENVRSPCGGKSYKEIPTIDIAGAGYDITIGEEIGTILDNQRYNGRCYTVRSGEHDKK
FRVPANIQTFRFQVSADTSFVITSYDSSKEFLDSQQGDVTRKLEPKSSFTYGDIYSVSGG
ATNTKNQKTLRVVRQGASSDAKYFKIHSNIVLSQFRTLRRNFLLSYQFRQRLLELPDGYD
HIKYAEVLADFGTHFYSSGTLGARYEFIYRYSKKELEESGLTHEEQKNCLKTEATFRLLK
FTFGGDTNKCSTNVMSRRYNGSFTLAAKEVISNVVGGYSDKAASLAFFANNVPNSNDYDA
WVETIKHNPAVIDFSLSPISSVVSDQVKRQNLERALFDYLSKYTPSKCKGVCANGGRAVV
VDGGMTCKCLCSAGHGGSSCER
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggatagcgattttgagcattgcagttttgtttagtattactgaagcacggttt
cgtataagacgaaggcgtaatgccccagcacctgtgcactgcgcggtttcaagttggagc
gcctggtcagcttgttcggttagttgcgctggcggtgagaggtcaaggtcaaggaggata
ataagacaccccgcacatggtggaaatggatgtccaggtctccaccagaaaggcaagtgc
agccaacatagatgtcccattaactgtgagtggggggaatggggagcttggtcaagctgt
tcgccctgcccacctggagggagaagtcgcagtcgcaacattacaacagcatccatgttt
ggtggacaagcttgtataggaggagagtttaattcagattacaattgcctcagcgaggaa
gattgcccgctgtttcaatgtcctgatgaaacgtttgcatgcgcagatgaactaacctgt
atacggcccaacctgcgttgcaacggagacgacgattgcacagataactcggacgaagaa
aactgtggagaaaacgtcaggtcgccatgcggtggaaaaagctataaagaaataccaact
atcgatatagctggcgctggatacgacataacgattggtgaagagattgggacaatattg
gacaaccagcgatacaacggtcgttgttacactgtgaggagtggtgaacatgataagaag
tttagagttcctgccaatattcaaacgtttcggttccaagttagtgcagatacctcattc
gtgattacgtcatacgacagctcaaaagaattcttggattctcagcagggtgacgttacg
cgtaaacttgaacccaagtcttcattcacttacggagatatatacagtgttagtggtgga
gcaacaaatacaaaaaatcagaaaacgcttcgtgttgttcgacagggggcatcgagcgat
gcaaagtattttaaaatccacagcaatattgtgttgtcgcagttcagaactcttcgacga
aacttccttctttcgtatcaattccgccaacgattactcgagctaccagacggatacgat
catatcaagtatgctgaagtactggcagattttgggacccatttctattcttctggaacg
ttgggagcaagatatgaatttatttatcgatattctaaaaaagagttggaagaatcaggt
ttaacacacgaagaacaaaagaattgtctaaaaactgaggcgactttccgtctattgaag
tttacgtttggcggtgacaccaataagtgctcaacaaatgtaatgtcgcgaagatacaac
ggtagcttcactctggcggcaaaagaagttatttcaaacgtagtaggcgggtattcagat
aaagcagcttcacttgctttctttgcgaataatgttccaaacagtaacgattatgacgca
tgggtggaaacaatcaaacacaatcctgctgtcatagatttttctttaagccctatttca
tccgttgtttcggaccaagtgaaacggcagaacttggaacgtgccttgtttgactatttg
tccaagtacacgccatccaaatgtaaaggagtatgcgcaaatggtggtcgagctgtggta
gtggacggtgggatgacttgcaagtgtttgtgttctgctggccatggtggtagttcatgc
gagagatga
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