Ciona intestinalis (yellow sea squirt): 100180056
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Entry
100180056 CDS
T01056
Name
(RefSeq) long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1
KO
K00255
long-chain-acyl-CoA dehydrogenase [EC:
1.3.8.8
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00071
Fatty acid degradation
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
Module
cin_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
100180056
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.8 long-chain acyl-CoA dehydrogenase
100180056
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GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
100180056
NCBI-ProteinID:
XP_002126870
Ensembl:
ENSCING00000009605
LinkDB
All DBs
Position
9:5350285..5356995
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AA seq
451 aa
AA seq
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MKDVCESVLRGSKILKGCRQFYPQVLRSVSMKLRPGQINRLFSTSSAAASEFRKEGFQSG
RFTDIGTRQIFNEDHDMFRESVRKFYQEEVLPYHDQWEEEGQVSRELWLKAGDMGILGVN
TPEEHGGIGGDWLSAAIVHEEQGYVNCSGPGFALHSDIVMRYITKYGTPEQIEKYIPDMT
AGKKIGAIAMTEPGAGSDLQGVRTFAKKDGDDWVLNGSKVFITNGWMADVVIVVAITDKE
AKSAAHGISLFLVDGDNPGFIKGKKLKKMGLRAQDTAELFFEDCRLPSSALLGGKAGLNA
GFYQLMQELPQERLLISNLCMAACEFMFEETRDYVKQRKAFGKTLSKLQTIKHTLAEIKT
ETAVARGFLDRCNDLHNQRKLDTSTASMAKYYVTDLNNTVAYRCVQLHGGWGYMWEYPIC
KAYVDARVQTIYGGSNEIMKELISRDIEKDV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtttgtgaatctgttttacgcggcagtaagatactaaaaggatgtcggcag
ttttacccccaagtgttgcgatctgtgtcaatgaagctccgtcccggccagataaaccgt
ctcttcagcacttcgtctgctgcagcttcagaatttagaaaagaaggatttcaaagcggg
agatttactgatattggaacaaggcaaattttcaatgaagatcacgatatgttccgagag
tcggtgagaaagttctaccaagaggaagttttgccctatcatgaccaatgggaagaagaa
ggccaagtaagcagggaactgtggcttaaagctggggatatggggatcctgggggttaat
acaccagaggaacatggtggaattggtggtgattggttatctgctgctatagtacatgaa
gaacaaggttacgtcaattgctcgggtccaggttttgctctgcactctgatatagtgatg
cggtacatcacaaagtacggaacgccggaacaaattgagaaatatattcctgacatgact
gctggcaagaaaattggtgcaattgcgatgactgaacctggtgctggtagcgatttacag
ggtgttcgtacttttgcgaagaaagatggtgatgactgggttctaaatggaagtaaagtg
tttatcacaaacggttggatggcagatgtcgttattgtcgttgctatcacggataaagaa
gcaaaatctgcagctcatggaataagtcttttccttgtagatggtgataacccaggattt
atcaagggaaagaaattgaagaaaatgggactcagagcacaggacacagcagaactgttt
ttcgaagactgtcgcttaccttcaagtgcattactgggtggaaaagcaggtctgaacgcc
gggttttaccagttaatgcaggaattgccccaagaacgacttctcatcagcaacttatgc
atggctgcatgtgaattcatgttcgaggagacgagagattacgtgaagcagagaaaagct
tttgggaaaactctctccaagctgcagacaatcaagcacactttggctgaaattaaaaca
gagactgcagttgcaaggggattcttggatcgttgcaatgatcttcataaccagaggaag
cttgacacgtcaactgcatccatggcaaagtattacgttactgacctcaacaacactgta
gcttacagatgcgtgcagttgcatggtggttggggttacatgtgggaataccccatctgc
aaagcgtatgttgacgcacgtgttcaaaccatctatggtggcagcaacgaaattatgaag
gagcttatttctcgagatattgaaaaggatgtgtag
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