Ciona intestinalis (yellow sea squirt): 100180082
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Entry
100180082 CDS
T01056
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X2
KO
K24992
myelin expression factor 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100180082
Transcription factors [BR:
cin03000
]
Eukaryotic type
Other transcription factors
Others
100180082
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RBD_DEAH11
RRM_occluded
JAKMIP_CC3
Motif
Other DBs
NCBI-GeneID:
100180082
NCBI-ProteinID:
XP_002131522
Ensembl:
ENSCING00000003046
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MADFKMKQDNKRVGSRSPSPRAGRDRVERISLKKERPAPYHRNGRDHPPGGRARNPPFPR
VFVNNIPYEEKWQAIKDLFRSKVGEVTYVELFMQDKGKSRGYGVIEFKDKETCHKAVELM
NRYEINNRKIVVREDFHGDLVRKNLERDGHPRPHDMRGPPPMHNMPPPMGGHQGPMPPMP
PPMNDMNRGPMGMNKPMPDMGRPGPMGKTVFVANLDYKVTYSKVKEVFQLAGKVVKVELM
LDKDNKSRGMATVTYEEPMEAAQAISMLNNQRLYDRIMIVKMDKDNSKEKKLELPSGLAG
IGPGISRNPPRPDMGVGGMGDGMMNKFPPSMMSNPAPVPSLAGGLPGLAGLGLPGSLAAV
TDLMKAGGLGLGGLASLAGINDITKHLGLRDPMDQRMLQDQRNRLLAATRGFSERDRIEM
DIASVDNRIRDLDRSLAERSSSLNSTNLPQSKQTSMPPPMRNGNRVPGTTVFVRNLPYSL
TWQKLRDKFTRCGHVLFAEIKMDNGKSRGFGNVRFETVEQAQAAVRYFNGAEIEGRNIDV
HVDNRG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcaaaatgaaacaagacaacaaacgtgtcggcagtcgatctccaagccca
cgtgcaggtcgcgatcgtgtggaaagaataagccttaagaaggaacgacctgctccgtat
cacagaaatggtcgtgatcatcctcctggaggaagagcgaggaatcctccatttccgcgt
gtcttcgtcaacaacataccatatgaggaaaaatggcaggccataaaagatttatttcga
agcaaagttggggaggtgacttacgtggagctctttatgcaggacaagggtaaatctcgg
ggttacggtgtgattgagttcaaagataaagagacgtgtcacaaagctgtggaactcatg
aacagatatgaaattaacaacaggaaaattgttgtgagggaggattttcatggagatttg
gtacggaagaatctagaaagagacggacacccaagaccccatgacatgagggggccacca
cccatgcataacatgcccccacccatgggtggacaccaaggtcccatgccacccatgccc
ccacccatgaacgatatgaacagggggccaatgggaatgaataagccaatgcctgacatg
ggacgaccaggaccaatgggaaaaactgttttcgtggcaaacctcgattacaaggtaacg
tactcgaaagtaaaagaagtgtttcagcttgctgggaaagtggttaaagttgaacttatg
ttagataaagacaataagagcagaggaatggcaactgttacgtatgaagaaccaatggaa
gcagcacaagctatatcaatgcttaacaaccaacgtttgtacgatcgtatcatgatagtg
aagatggacaaagataattctaaagagaagaaattagaattaccaagtggtctagctggt
ataggtccaggtatatcaaggaacccgccaagaccagacatgggtgttggtggtatgggt
gatggtatgatgaacaaattccctccttccatgatgtccaaccctgcaccagtaccttca
ttggctggtggtttgccaggtttagctggcttaggtctacctggtagtcttgcagcagtt
acagatctcatgaaagcaggaggattaggactcggaggtttagcgagtcttgccggtatc
aatgacatcacaaaacatctcggacttcgagatcctatggatcagaggatgttgcaagat
caaagaaatcgtcttcttgccgcaaccagaggattttcagagcgggatcgaattgaaatg
gacatagcgtccgtggacaatcgcatacgcgacctggaccgctcactcgccgaacggagc
agcagtctaaactccaccaatctccctcaatccaaacaaacatccatgcccccaccgatg
cgcaatggtaacagagtcccaggaaccacggtgttcgtccgtaatctgccctacagttta
acgtggcaaaagctgcgtgacaagttcaccagatgcggtcacgtgctcttcgcggagatc
aagatggacaacgggaagtcacgtggtttcggtaacgtccgcttcgagacagtggagcag
gcccaagcagcagtgcgatatttcaacggagccgaaatcgaaggacgaaacatcgatgtt
catgttgataatcgaggttga
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