Ciona intestinalis (yellow sea squirt): 100180161
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Entry
100180161 CDS
T01056
Name
(RefSeq) protein RFT1 homolog
KO
K06316
oligosaccharide translocation protein RFT1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100180161
Transporters [BR:
cin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
100180161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rft-1
TMEM251
Motif
Other DBs
NCBI-GeneID:
100180161
NCBI-ProteinID:
XP_026694892
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSKSNKDINTVLASASKLASYNMLLQLSFRVLTFILNAFVLRHVTKETLGVVNVRLLLLY
STILFMSREAFRRACLSSRDDGAVGEKDIKKKVKWKQTINLLWCMVPVGIVWTIILVYCW
RNLFENPDPAEIPHYPLAVVIFGCCACVELIAEPLWVLAQVFLFVKLKVVAEGLAILIKC
LVTVSLVVAFPQWGLVSFCIAQVSFSITYICAYYGYFIWFIKSKKSKQSDDFPLHNVEQL
FPQFDSNEGENLIDSLTAKLSLSFFKQSVLKQILTEGERYVMTILNVLSFADQGVYDVIN
NLGSLVARFIFLPIEESFYLFFAKTLKRGAESKQQPLEEIVAVTKVFSCLLRLVVIVGAV
ILSFGVPYSHLLLDLYGGSTLSSGPGPMLLNFILIYRYNKKMLLFSILFLSCSYYLTKAI
GSVGFIIANCLNMLARILHSVVYINRYYSNFQSIASPLLGLIPGISVILTLCLSSIICMM
SQSFFCCNKGLLLRVFHVITGAVCCIFTAVVIWFTETDMVQFLKDQFLSKYFQKKKAE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcaaacaaggatataaacactgttttggcaagtgcgtcaaaactggcatct
tacaacatgttattacagttgtcgtttcgggtgctaacattcatattgaatgcatttgtt
ctgagacatgtcaccaaggaaacactgggtgttgtcaacgtacggttactacttctttac
tccacgatattgtttatgtcaagggaagcatttcgaagagcttgtttaagttcaagagat
gatggagctgttggtgagaaagatattaaaaagaaagttaaatggaagcaaacaataaat
ctactctggtgcatggttcctgtaggcatagtatggacaataatcttggtatactgttgg
cgcaacttgtttgaaaatcctgacccagcagagatacctcactacccattggcagtcgtt
atatttgggtgttgcgcatgtgttgaactcatagctgaaccactatgggtgctcgcacaa
gtatttctatttgttaagttaaaagttgtggctgagggacttgctattcttatcaagtgt
ttggttacggtgtctctggttgttgcttttccacagtgggggcttgtttccttctgtatt
gcacaggtttcattctcgatcacgtacatctgtgcatattatggatatttcatctggttc
ataaagtcaaagaaatccaaacaatctgatgattttcctcttcataatgtggagcagctg
tttccgcagttcgattcaaacgaaggggaaaacctaattgattctttaactgcaaagctt
tcattgagcttttttaagcagtctgtcttgaaacaaattttaacagaaggtgaaagatac
gtcatgacaattctcaatgtgctttctttcgctgaccaaggggtttatgatgtcataaat
aaccttggatcacttgtagcaaggttcattttccttccgatagaagaaagtttttattta
ttttttgccaaaactttaaagagaggagctgaatctaaacagcaaccattggaggaaatt
gtcgccgtcacaaaagtttttagttgtttgcttaggctagtagtgattgttggagctgtt
attctttcgtttggtgtcccttattctcatttgctgcttgatctgtatggaggatccacc
ctcagctcaggacccgggccaatgctgttgaactttattttaatttacaggtacaataag
aagatgttattgttttcaattctcttcctttcatgttcgtattatctgaccaaagcaatt
ggctcggttggttttatcatcgcaaactgcctcaacatgttggcaaggattcttcatagc
gtggtttacattaatcgatattattcaaacttccaatccattgcttcaccattgcttgga
ttaattcctgggatttctgttattttgacactttgtttaagcagcataatatgtatgatg
tcacaatctttcttctgttgcaacaagggattacttttgcgtgtttttcatgttattact
ggtgcagtatgctgcatatttactgcagtagtgatttggttcactgaaacagacatggta
caatttttaaaggatcagtttttgtcgaagtattttcaaaagaagaaagcagaatga
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