Ciona intestinalis (yellow sea squirt): 100180173
Help
Entry
100180173 CDS
T01056
Name
(RefSeq) sphingomyelin synthase-related protein 1
KO
K22697
phosphatidylethanolamine phospholipase C [EC:
3.1.4.62
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
100180173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100180173
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.62 phosphatidylethanolamine phospholipase C
100180173
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100180173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP2_C
SAM_1
SAM_2
SAM_3
DUF6989
Motif
Other DBs
NCBI-GeneID:
100180173
NCBI-ProteinID:
XP_002127040
LinkDB
All DBs
Position
12:164622..171817
Genome browser
AA seq
411 aa
AA seq
DB search
MYIHEWGCEEVKVWLKSEGFEKYSELLCEKHEVDGDVLLSLTEKDLRNPPLQFKKLSDIK
KLWRCLKLLQQKSKIERRVLNGVSHHKRSQIYTTTTNNNHHSDDGRGSSYDETDHSSYID
SDIEVSMRSRGKDVAFLPELNKLFVSFLYATFVSWVTAYMMVLVHERVPDKQKYPPLPDI
FLDNVPLIPYAFQLAELCGLSLAIVWLFILFFHKHRMILLRRFFSIASSVFLLRSVTIIV
TSLSVPGQHLQCSAMYHSAWQRFVRATEIVAGFGMTLTGVHTCGDYMFSGHTAYLTLFNH
LITEYTPSKYYRLHTFSWVLNLFGIFFVLAAHEHYSIDVVIAFYITSRIFLYYHMLANTR
CYWYSKRVKIWFPLLSYFECNVPGKIPNEYCWPVTRSDVKRWIQPLYKKNK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtatattcacgagtggggttgcgaggaagtaaaagtttggttgaaatctgagggtttt
gaaaaatattctgagttgctttgtgagaagcatgaggtggatggagacgttttgttgtcg
ttgactgaaaaagatctccggaatcctcctttgcaattcaagaagttaagcgacataaag
aaattgtggcgatgtttgaaacttttgcaacaaaaaagtaaaattgagcgtcgtgtatta
aatggagtgtctcaccacaagaggagccagatatacacaacaaccaccaacaacaaccat
catagcgacgatggtaggggttcaagttacgacgagacggatcattcttcgtacattgat
agcgacatagaggtctctatgaggtcacggggcaaagatgtcgccttcttaccagaactc
aataaattgtttgtgagctttctatacgcgacctttgtgtcgtgggtcaccgcatacatg
atggttctcgtgcatgagcgagtacccgacaaacagaagtacccccctctccccgacatt
ttcctcgataacgtcccgttgatcccgtacgctttccaacttgccgagttatgcgggctc
tcccttgccatcgtgtggctgttcattctgttcttccataaacacagaatgatccttctg
cgtcgtttcttcagcatcgcgagctccgtttttctcctaaggtccgtcaccatcattgtg
acatcactgtcggtaccggggcaacatttacaatgttcagcgatgtatcactcagcatgg
cagcggttcgtgcgcgcgactgaaattgtagctgggttcggtatgacactcactggtgta
catacttgtggtgattatatgtttagtggtcacacagcgtacttaactttgttcaatcat
cttattactgaatacaccccaagtaaatattatcgtcttcatacattttcctgggttctt
aatttgtttggaatattctttgtgctcgctgctcatgaacattattccattgacgtagtg
attgcattctacataacatcgagaatattcttatattaccacatgctcgccaacacaagg
tgttattggtacagcaaacgtgtaaagatttggtttccattgctttcatactttgaatgc
aacgtacccgggaagattcctaatgaatattgttggcctgttacaaggtcggatgttaaa
aggtggattcaacctttgtataaaaagaacaagtga
DBGET
integrated database retrieval system
