Ciona intestinalis (yellow sea squirt): 100180222
Help
Entry
100180222 CDS
T01056
Name
(RefSeq) TBC1 domain family member 2B-like
KO
K20166
TBC1 domain family member 2B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100180222
Membrane trafficking [BR:
cin04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100180222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
SYCE1
NPV_P10
Crescentin
Motif
Other DBs
NCBI-GeneID:
100180222
NCBI-ProteinID:
XP_002125652
Ensembl:
ENSCING00000013434
UniProt:
F6V318
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MSCPTGVLIDFTNSEQSNDKNTTQNVPVPESTNSSEVNTSVTSVVSSSESGNKKGKLCGY
LTKISTTGLMKTMKSRWFIYAPETCELAYYRSSDSDIANNTSLGKIPLRQASFSVTAPEL
QDNIFTITAENVTHKLQASDRKALLWWLQELQSHRRVFNTNHSFDTDDKTEWHGTLLGSS
VFWVPNTTDTCKGLLTVGPAKKRQTDDGGLNLNILPHIDQPPDTVAGTAASPKRQPSLNV
LSNSSLASLSARMPSLNAAISNASEVAMKGLRSSASRLRAPTFSVRGSDKVDLGLKNSLS
GSLTDIRQAINSSENKTPNIQTQVESLQNKNDRLNEELELLKNSLQTKEETVQVLKLALQ
EKESNPNPNTGGTKSTSNLRSELIEIRMKNESLQQNLNESKEKETELTEQICMLHEMITA
KDQVLVQLSNEVYELESSYKSLLNENSTLKENKSEEFVMVAPVAEDVDLLKDTLEGYTVQ
NKFLNMEILELANLRQLDTRKIKMLRDRCSQQEAEYCQLHSKYLVLLSEMNKPRTESLGL
TVSGTKIAGSSDADRKEMMKILISEALDDAAENSTKEDQKESKWDEFGFSRSLEDETETS
LLSTASRLQKRSSDILYSLSQHKASIAIKWQNYLSINKELQGNQELKMLIRMGIPHELRP
QVWSWMVERRISQLRHRLDSGGSYYSQLVESKEAQLPSKQIELDLLRTLPNNRHFASMAC
SGVEQLRRVLRAYSVHNPSIGYCQGLNRVAAVALLYLCEEDAFWCLVAVVEQIMPPDYYS
MTLTASQADQRVFRDLLAEKLPRLHRHFEAANVDTSLITFNWFLCIYCDNIPAETMLHVW
DVLLYEGSKVLFRFGLAFFKSVEEEILQLNDYIAIFNFLRVMSHRMHDVRSLTQIAFQTL
NHFPMRKIHRLRALHLEKVNAELRELENLRRGFVSVRKNVQDADADSDEDS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcccaactggtgtattaatagattttaccaacagtgagcaatccaatgataaa
aatactacacagaatgtaccggtaccagaatctaccaactccagtgaagtaaatacctca
gtgacttctgttgtttcatcaagtgaatccggaaataaaaaaggcaaactatgcggctat
ttaacgaaaatatcaaccactggactaatgaaaacaatgaaatcaagatggtttatttat
gcccctgagacttgtgagttggcttactacagatcatctgacagtgatattgctaataat
acttcactgggtaagattccattacgacaagcttcatttagcgtcacagctcctgaactg
caagacaatatatttacaatcactgctgagaatgtgacacataagttgcaggcaagtgac
cgcaaagcattgttatggtggctgcaggagttacaatctcatcgacgtgtattcaacaca
aatcattctttcgacacagatgataaaacagaatggcacggaactttattaggctcaagc
gtcttctgggttcccaacaccactgatacttgtaaagggttacttactgttggacctgct
aaaaaaagacaaactgatgatggaggtttaaacttgaacattcttccccatattgaccaa
ccaccagatactgtggctggtacggctgcgtctccgaaacgacaaccatcattaaatgtc
ttgtccaacagtagcctggctagtttaagcgctcggatgccaagtttaaatgcagctatc
tctaatgcaagtgaagttgcaatgaaaggtttgagaagcagtgcaagtcgactacgagct
ccaactttttctgttcgaggatcagacaaagtagatcttggtttaaagaactcattatct
ggttcattgactgacattcgacaagccataaatagtagtgagaataaaacacccaacatt
caaacacaagttgaaagtttgcaaaataaaaatgatcgtctcaatgaagaactggagctg
ttgaaaaatagtcttcaaacgaaagaggaaactgttcaagttttaaaattggcgttacaa
gaaaaagaaagtaatccaaacccaaacacaggtggcacaaaatctaccagcaatctaaga
tctgaactgatcgagatcagaatgaaaaatgaaagtcttcaacaaaatttgaatgaatcc
aaagaaaaggagactgaactgactgaacagatatgtatgttgcatgaaatgataacagca
aaggaccaagttttagttcaactaagtaatgaggtatatgaacttgaatcttcttacaag
tccctgttaaatgagaactcaacattaaaagaaaacaaaagtgaggaatttgtcatggtt
gctcctgttgcagaagatgtggatttacttaaagacacacttgaaggatatacagttcag
aacaagttcttgaacatggagatactagagttggcaaacctgagacaactcgatactcgg
aaaataaaaatgttaagagacagatgctcacaacaagaagcagaatattgtcagcttcac
agcaaatacctcgttctactctcggagatgaacaaaccgagaacagagagtttaggactc
acagtttctggcacaaagatcgctggatcctcggatgcggatcggaaagaaatgatgaag
atcttgataagtgaagcgctggatgatgctgcggaaaactcaaccaaggaggatcaaaaa
gaaagtaaatgggatgaatttggattcagtcgatctcttgaagatgaaacggaaacttct
ctcctctcaactgcatccaggttacagaagagatcttcagatattctatattcgctgagt
cagcataaagcctctattgccatcaagtggcagaactacctgtcaatcaacaaagagctt
caaggaaatcaagaacttaaaatgttgattcgaatgggaattccacacgagttacgccca
caagtgtggagctggatggtggaacgaaggatttctcaacttaggcaccgcttggactct
ggtggttcatattactcccagttagtagaaagcaaagaagcgcaactaccttccaaacaa
attgaacttgacctgcttcgaactcttcccaacaatcgtcattttgcatctatggcgtgc
agtggagtggaacagctgaggagagttctgcgagcgtacagtgttcataacccaagtatt
gggtattgccaaggtcttaaccgtgtagcagctgtagcgttactctacctgtgtgaggaa
gatgcattctggtgtctggtggccgtggtggaacagattatgccaccggattattacagc
atgactctcactgcttcacaggctgatcagagagttttccgtgacttattagctgagaaa
ctaccacggttgcatcgacattttgaagcagcaaatgtggacacttcgcttattactttc
aactggttcctctgcatatattgtgataatataccagctgagaccatgcttcatgtatgg
gatgtgttgctatatgaaggaagcaaggtcttattccgatttggtcttgcgtttttcaaa
tcagtggaagaagagattcttcaattgaacgactacatcgctatttttaacttccttcgt
gttatgtctcaccgcatgcatgatgtcaggtcattgactcagatcgccttccaaactctt
aaccatttcccgatgcgtaagattcaccgccttcgtgcgttgcacctcgaaaaagtgaac
gccgaacttcgggagttggaaaatcttcggcgaggatttgtgagtgtgaggaagaatgta
caggatgctgatgctgatagtgatgaggactcatga
DBGET
integrated database retrieval system
