Ciona intestinalis (yellow sea squirt): 100180229
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Entry
100180229 CDS
T01056
Name
(RefSeq) NSFL1 cofactor p47-like isoform X1
KO
K14012
UBX domain-containing protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100180229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100180229
Membrane trafficking [BR:
cin04131
]
SNARE
SNARE associated proteins
Others
100180229
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Ortholog
Paralog
GFIT
Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
Spt20_SEP
TAP_C
Motif
Other DBs
NCBI-GeneID:
100180229
NCBI-ProteinID:
XP_002121882
Ensembl:
ENSCING00000001500
LinkDB
All DBs
Position
7
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AA seq
389 aa
AA seq
DB search
MSSQDEMVTEFRGITDASEERARFFLESSGWQLQVALSSFFDSGIAENPTAMSEDEVDEE
YVPEEDPEPPKNKPGVSTRSSKVEPKRTTRSSKFASVHDYKNNKNDDSSEEEGQRYYAGG
SEHSGELIVGPPRKKNTNQQIKDLFKEAKEHGAEVVDEPRKHGKEKEKKKYFTGAGYKLG
DGGEDSPSVFVPGEVEQQRPGPVNVVLKLWSNGFTVDDGPLRDFNDPQNQEFLQSVKKGQ
IPQELIRNAKGGEVHVDMEDHREEDYKPQKKKLKPFSGQGQMLGSPTPQVETSPAPSISS
SVDPPISIDQSKPSTNIQIRLLDGTRIRQQFNHDHRVSDIRSFILNSQPNMGSRPFVLMT
TFPNKELTNENETIAGAQLLNSQVVQKLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcaagatgaaatggttactgagtttcgtgggattaccgacgcgtcggaggag
cgagcaagattttttctagagagttccggatggcagttacaggttgctttgagcagtttc
tttgattccggaatcgcggagaacccgacagcaatgagtgaagacgaggtcgatgaggag
tacgttccagaagaagaccctgaacctccaaagaacaaaccaggagtgagcacgaggtcg
tcaaaagttgaaccgaaacgcacaacccgatcatccaagtttgcgtccgtgcacgattat
aaaaataacaagaacgatgatagcagcgaagaagaaggccagagatattacgctggaggt
tcagaacacagcggtgaacttatagttggaccacctagaaagaaaaacacaaatcaacaa
ataaaagatttatttaaagaggcgaaggaacatggggctgaggtggtcgacgaaccaagg
aaacatgggaaggaaaaagagaagaagaaatatttcaccggtgcgggttacaaacttggt
gatgggggggaagattctccatcagtgtttgttcctggagaagtagagcaacaaagacct
ggtcccgtaaacgtcgtgttaaagttatggtccaatggtttcactgtcgatgacggacca
ttaagggattttaacgacccgcagaaccaagaatttcttcaaagtgttaaaaagggccaa
ataccacaggaattaatacgcaatgcaaaaggtggagaggtccatgtcgatatggaagat
cacagggaagaggattacaaaccacagaagaagaaacttaaacctttctctgggcaagga
cagatgcttgggagccccaccccccaagtagagacgagccctgccccctccatctcatcg
tcagtggacccgcccatttctattgaccaatcaaaaccttcaactaatattcaaatcaga
ttattggacgggacgaggatacgacaacaattcaaccacgaccacagagtctccgatatt
cgatcttttattttgaactctcaacccaacatggggtcacgacctttcgtactaatgaca
acatttcctaataaggagttgaccaacgaaaacgagacgattgctggcgcccaacttctc
aactcacaagtcgtacaaaaactaaaataa
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