Ciona intestinalis (yellow sea squirt): 100180235
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Entry
100180235 CDS
T01056
Name
(RefSeq) ankyrin repeat and SOCS box protein 3
KO
K10325
ankyrin repeat and SOCS box protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100180235
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
100180235
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
SOCS_box
DUF5098
Motif
Other DBs
NCBI-GeneID:
100180235
NCBI-ProteinID:
XP_002119985
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Position
4:4101342..4103238
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AA seq
528 aa
AA seq
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MAELFGLSYVDTCSAVGLAARNGNVELLKRLLLEQKDYCVKDNRGWFPIHEAASKGHTEC
VQLLIETALENGEVPSEIWPLPFDVMAAGSPLCLAVAGGYLNTVEILLNLCQTNEPDLCD
ALMRSVHYPDILKLILGKFPGIIVSELIGDGSEGSPLHAAVTHENLESVKILLKAEINIE
FIDDFGRTPLHIAVCIKDTLNRIAITNILLDNHCNVNACDEKHFTPLYLAVQRDYTEIIQ
LLLNHNADPHLSAMCNFGKHDIEVSPIAAAAYLGNLQAVKLLVQYTSKKKLGLLKSCSPV
SIAVQGACAGCLLALLDAGYTIDGLLPDCIAADLTDTLFYGEDILCNLLPWCFELVETAQ
VLEILLSRGAALSGKFVDKSMFIPMMISSEQHSFYVLKVLLKYGLHEKMLNNELPSSAQK
IHVKFFNVLQSSLLSSNEDDENDEIENINIKKLNLLFSVIPNISFKVCSNSLDFTHAEIA
MVAPNLQELCRWTIRQTMLQNTGLSAINMLNIPPLLKRYLFYSDLNSM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttatttggcctgtcatacgtagacacatgctcggctgttgggttagcagcc
agaaacggcaatgtggagttacttaaaaggttgctgctggaacaaaaggattactgcgtg
aaggataacaggggctggtttccaattcatgaagctgcaagcaaaggccatactgagtgc
gttcaacttttaattgaaacagcattagaaaatggcgaagtcccttctgagatatggcca
ttaccgtttgacgttatggccgctggaagccccttgtgcttagctgtagcaggtgggtat
cttaacactgtggaaatattgctcaacctttgccaaactaatgagcctgatctatgtgat
gctcttatgagaagtgttcactatcctgatatattaaaactaatattaggtaaatttcct
gggattattgttagtgagttaatcggtgatggatcagaagggtccccccttcatgctgcg
gtaactcatgagaatttagaaagtgtaaaaattctactgaaggctgaaataaacattgag
tttatagatgattttggtagaacccctttgcacattgcagtctgtattaaagacactctg
aatagaattgcaattacaaacatattgcttgataatcactgtaacgttaatgcttgcgat
gagaaacactttacaccactgtaccttgcagtgcagcgtgattatacagaaattattcaa
ctgctgctcaatcataatgctgaccctcacttgtcagctatgtgtaactttggaaaacat
gatatagaagtttctcctattgcagcagctgcctatcttggcaacctgcaagctgtaaag
cttttagtgcaatatacaagtaaaaagaaacttggtttgctaaaatcctgctctccagta
tcaatagctgtacagggtgcttgtgcaggatgcttgcttgcattacttgatgctggctac
accattgatggattattacctgactgtattgctgcagatttaactgatactttattttac
ggtgaagacattctttgcaatttgctaccttggtgttttgagttggttgaaactgcccaa
gtgcttgagattctcttatcacgtggagctgccttgtctggtaaatttgtggacaaatcc
atgttcattcctatgatgatttcctctgaacagcattcgttttacgttttaaaggttcta
ctaaaatacggacttcatgagaaaatgttaaataacgagcttccttcttctgctcagaag
attcacgtcaaattcttcaatgttttacaaagttcgcttttatcttcaaacgaagatgac
gaaaatgatgaaattgaaaatatcaacattaaaaaactaaacttgttgttttctgtcata
ccaaacatatcatttaaagtttgcagcaacagtcttgattttacacatgctgaaatagcc
atggtggctcctaacctacaagagttatgcagatggacaattagacaaaccatgcttcaa
aacactggcctgtctgctataaacatgttaaatataccacctttgttaaaaagatatttg
ttttattccgatttgaacagtatgtaa
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