Ciona intestinalis (yellow sea squirt): 100180266
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Entry
100180266 CDS
T01056
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100180266
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100180266
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100180266
Protein phosphatases and associated proteins [BR:
cin01009
]
HAD phosphatases
Fcp/Scp phosphatases
100180266
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100180266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
FCP1_C
BRCT
PTCB-BRCT
Biotin_lipoyl
Motif
Other DBs
NCBI-GeneID:
100180266
NCBI-ProteinID:
XP_002131972
Ensembl:
ENSCING00000008984
LinkDB
All DBs
Position
3:complement(5043889..5051011)
Genome browser
AA seq
895 aa
AA seq
DB search
MESVLVPGEKPVRLLQWLVKVGDWLKYGTPVAIYRCIEDPSTGVKSKEMELKSRKVGKVK
KFAMEVGQVAKPGGMILEMEACSHPVVMKDMCAECGVDLRMVKRRCEKQAHVSMIPSVPE
LKISKQQAEEIGNQDKSRLHKLNKLVLLVDLDQTLIHTTQNQAFAAMCSEEKDFFTFQLH
KNEPTLYTKLRPYCREFLQEISKCYELQVVTFGSRLYAHKIAEFIDPKKKFFANRILSRD
ECINPMKKSGNLRHLFPCGDSMVCIIDDRDDVWSSAPNLVMVKKYSYFPGSGDINSPDKV
EAKKQTGDTAKSETSKEVDKPQEVETESPAVDNNSNNTRKRKSETDENDKSSKIMKNSHD
GCDENEQKVKEKIIKQTNNGGNKKVECETKMECNNDADKPEVMIDASKNKEEEDEKNDNS
EDVVLSSDSESDSSSDSSSSSSGSENSKDQIAETNSVEQSCQVSTSASSTESNGTSNTDN
TTASSKENIKNKSEINTDSTVPSDVVSICKTTTIDNGSHSATAVCQKKENNSQVLADHDD
YLKYLQSILTCIHYTYYDAYKKHLNGEFEHPPDLRGVVPFLRSKVLYGCCIVLTGIIPNN
FKAAPHMHRAHIVARQLGAAINSTVDENTTHLIGAKKGTAKYQDALKMGKKKIHMVSIEW
LWACSDRWERVSEKLFPMPSKSSRHSRSRSGTPPVHKSVNVTPAQTSEKRYDAVTGKLLK
KVLDPRFEFMVSEAVTRKQKRKSPLYTSLKNPEKVIPVQFNQSSNEASTSTAVSATRTRK
PSMAEVMGIGYTLSSNDIEDMDKEVEDLMNSDEDDGDELGTKIDRPVSSSSESSLLATRS
DSKPLNPDSILTKISESSSSSNNVSSSEEEFDHMAELLDHEMHYDEDSVNLDDMD
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgtgctcgtgcccggtgaaaaaccggtgcgccttttgcagtggttggttaaa
gttggtgactggcttaaatatggaacacctgttgctatatatcgttgcattgaggaccca
tccactggtgtcaaatcaaaggagatggagttaaaatccaggaaagttggaaaggtcaaa
aagtttgcaatggaagttggacaagtcgcaaaaccaggaggcatgatcctagaaatggaa
gcttgtagccatcctgttgtcatgaaagatatgtgcgctgaatgcggtgtagatttacga
atggtaaaaagacgatgtgagaaacaagctcatgtctccatgattccatccgtccctgag
ctcaaaattagcaaacagcaagcagaagaaattggaaatcaagacaaatcaaggcttcac
aaactaaacaaacttgttttgctggttgaccttgaccagactcttatccatacaacacag
aatcaagcttttgctgctatgtgcagtgaagaaaaggatttcttcacctttcagctgcat
aaaaatgagcccaccctgtacacaaaattaaggccatactgccgggaatttttgcaggaa
atatcaaaatgttacgaactacaggtggtaacatttggatctcgtttatacgcgcataag
attgcagaattcattgatccgaagaagaagttttttgctaacagaatattatcacgggat
gagtgcattaatccaatgaaaaaatctggtaatttaaggcatttatttccttgtggagat
tccatggtttgtatcattgatgatagagatgatgtatggagcagcgcgcctaatcttgtt
atggtcaagaagtattcctattttccaggttctggtgatattaacagtcctgataaagtg
gaagcaaaaaaacaaactggtgatactgcaaaatcagaaacctcaaaagaagtagacaaa
ccgcaggaagttgaaactgaaagccctgcagttgacaacaattcaaacaatacaagaaaa
cgtaaatcagaaacagatgaaaatgataaaagttcaaaaataatgaaaaactctcacgat
gggtgcgatgaaaatgaacaaaaagtcaaggaaaaaattataaaacaaacaaataatggt
ggaaataaaaaggtggaatgtgaaactaagatggaatgcaacaatgatgcagataagcct
gaagtaatgattgatgcttcaaagaacaaagaagaagaagatgagaaaaatgataactct
gaggatgttgtcctctcttccgattcagaatctgactcttcatctgactcgagctcaagc
tcttctgggagcgagaactcaaaagatcaaattgctgaaacgaattccgttgaacaaagc
tgtcaagtcagtacatcagcatcatctactgaatctaatggaacatcgaacactgataac
acaacagcttcttcaaaggaaaacattaaaaacaagtcagaaattaacactgactccaca
gtgccatcggatgttgttagtatttgtaaaactaccaccatcgataatgggagtcattct
gcaacagcagtgtgtcaaaaaaaagaaaacaattctcaagtattggccgaccatgatgat
tatttgaagtatttacaaagcatcctcacatgtatacattatacttattatgacgcatac
aagaagcatttaaatggtgaatttgaacatccacctgatttacgaggtgtcgttcctttc
ctacgaagcaaggttttatatggatgttgtattgttttgactggaataattccaaataat
tttaaagctgctcctcacatgcaccgagctcacatcgttgctcggcaattaggagctgca
attaattcaacggtggatgaaaatacaactcatctcattggtgcaaagaaaggtacagcc
aagtatcaggatgctcttaaaatggggaagaaaaagattcatatggtttccattgaatgg
ctgtgggcttgttcagataggtgggaacgagtatctgagaaattattcccaatgccatca
aagtcgtcccgtcactcgagaagcagaagtgggacaccaccagttcataaatctgtcaat
gtcacgcctgcgcaaacatcagagaaaagatatgatgctgtcactggtaaacttctcaag
aaagtgttggatcccaggtttgagttcatggtgtctgaggctgttacaaggaaacagaag
aggaagagtccgctgtacacatcattgaaaaatcctgagaaagtaattcctgtgcaattt
aaccaaagttcaaatgaagcgagtacctccactgctgtttctgcaacaagaacacgcaag
ccaagtatggctgaggtaatggggattggttacacactttcatctaatgatattgaggat
atggataaagaagttgaagacctgatgaacagtgatgaagatgatggagatgaactaggc
acaaagattgatcgtcctgtttcatcatccagtgaaagtagtttgcttgctaccaggtca
gattcaaagccgttaaatccggattcgattttaacaaaaatctctgaatcttcctcatcg
tccaataatgtttcatcttcagaggaagagtttgatcacatggctgaattgttggatcat
gaaatgcattatgatgaggacagtgtcaatctggatgatatggattaa
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