Ciona intestinalis (yellow sea squirt): 100180386
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Entry
100180386 CDS
T01056
Name
(RefSeq) putative Ras-related protein Rab-33
KO
K07920
Ras-related protein Rab-33B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100180386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100180386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100180386
04031 GTP-binding proteins [BR:
cin04031
]
100180386
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
100180386
Others
Specific organelles associated proteins
Auto phagosome
100180386
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100180386
GTP-binding proteins [BR:
cin04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
100180386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
PduV-EutP
ATP_bind_1
TniB
Motif
Other DBs
NCBI-GeneID:
100180386
NCBI-ProteinID:
XP_002125159
Ensembl:
ENSCING00000020309
LinkDB
All DBs
Position
7:467562..469616
Genome browser
AA seq
218 aa
AA seq
DB search
MLQSEKGSPTLPKRVFKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRERTLDID
GEQIKLQLWDTAGQERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPSWIEECERYSLN
ASEIPRILVGNKCDLKDQAEVDTNSATRFADANSMPLFETSAKADSEMGNIEAIFLTVAH
KLKSQKPMMKQDYPNMKRATVLSVDKEVLRTNEAPCSC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaatctgaaaaagggagccctacgttgcccaaaagagtcttcaaaatcattgta
attggggattcagatgttggtaaaacatgtctcacatatcgattttgtacgggtaagttc
cctgaaaaaactgaagcaacaattggtgtggattttcgggaacgaactctggacattgat
ggggaacagataaagctacaactttgggacactgcagggcaggaaaggtttaggaagtct
atggtacctcactactaccgcaacgtgcatgctgtggtttttacctatgatgtcacaaaa
ggtcgatcctttcaaggccttccgtcctggatagaagaatgtgaacgctactctcttaat
gcatctgaaataccacgaatactggtagggaacaaatgtgaccttaaagaccaggcggaa
gtggacacaaattcagcaacacgctttgctgacgctaactctatgcccttgtttgaaacc
tccgcaaaagcagatagcgaaatgggcaacattgaagctatatttctcacagttgctcat
aaacttaagtcacaaaagccaatgatgaagcaggactacccgaacatgaaaagagccaca
gtgctctcagtggacaaagaggtccttcgtacaaatgaagcaccttgtagttgttga
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integrated database retrieval system
