Ciona intestinalis (yellow sea squirt): 100180409
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Entry
100180409 CDS
T01056
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100180409
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100180409
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
100180409
NCBI-ProteinID:
XP_009862166
UniProt:
A0A1W3JIQ6
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Position
1:complement(2101195..2118540)
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AA seq
385 aa
AA seq
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MNTFPKTFWDKLDDLAQNDVETYSKFEQPDIPRDEILSRIEDEVVDLVHQISNGDSPWLQ
FRNRSSWKNAMYLPNVGLKLIEDPNLTTISFGNEGSVNKFGLTVKLLSMIYKLIQSGQVA
TKRDLYYEEPNLFSSQSIVDHIVDDISCMICVPRRWLNVVATSKGLVAGDLQFVDPDGQT
VDCSLNQSGLVVPVLVDNVSNIKTQHAKFVLVIEKDATFQRLLDQGFTTNMPCILVTGKG
VPDVNTRILIRKIWNELEIPVFGLMDADPHGIEIMCVYRFGSLSQSHDVHSLALPFMKWI
GVFPSDITRLRLPDDVTLPLSDKDKSKCRDIFARPYIEYHARLAEELHNMLRCDRKAEIQ
ALMRFSPNYLAQVFIPSKIKNANWI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttcctaaaacattttgggacaaacttgacgatttagcacaaaatgatgtt
gaaacttacagcaagtttgagcaaccagatataccaagagatgaaattttaagtcgtatt
gaagatgaagttgtggacttggttcatcagatttccaatggagattcaccatggttgcag
ttcagaaatcgtagcagttggaaaaatgcgatgtatcttccaaacgtgggattgaaattg
atagaagatccaaaccttacaaccatttcatttggaaacgagggatctgtcaacaaattt
ggtttgactgtcaagcttctatcaatgatatataagcttattcaatcaggacaagtagct
acaaagagagatttatattatgaagagccgaatttattcagcagtcagtccattgtagac
cacatagtagatgatatatcctgcatgatatgtgttccacgtaggtggttaaacgtggtt
gctacatctaaaggattagtcgctggtgaccttcagtttgtggaccctgatggtcaaact
gttgactgttcactaaaccagtctggtttagtagttcctgtgttagtggacaatgtttca
aacataaaaacacaacatgccaagtttgtgttggtcattgaaaaagatgcaacattccaa
agattgcttgaccaaggttttacgaccaacatgccttgcatacttgtaacaggtaaaggt
gtgcccgatgtgaacacccggattctcatacgaaaaatatggaacgaactcgaaattcct
gtgtttggtcttatggatgcagacccacatggtattgagattatgtgcgtttatagattt
ggatccctgtcacaaagtcatgatgtacatagcttagcattgccttttatgaagtggatt
ggtgtatttccttcagatattacaaggttaagactacctgatgatgtgactttaccttta
tctgataaagataaatctaaatgccgggacatttttgcaagaccatacattgaataccat
gctagattagccgaggagctacacaatatgctgcgttgcgatcgcaaagcagagatccag
gctttgatgagattttctcctaactaccttgcacaagtatttataccttccaagatcaaa
aatgcaaactggatataa
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