Ciona intestinalis (yellow sea squirt): 100180425
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Entry
100180425 CDS
T01056
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100180425
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100180425
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_RPS2
ACBP4_C
F-box_4
TACC_C
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
100180425
NCBI-ProteinID:
XP_002131798
UniProt:
A0A1W2WIN8
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Position
1:complement(1633244..1647438)
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AA seq
477 aa
AA seq
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MLEPLRKKKRRVEHCDYVNEDKENLEASVSAMSSRTENFKQKLEEFKTRQAFLPSENEGL
INHKLPKELLLRIFSYLDIVTLCRCAQVSPSWNNLALDGSNWQRVDLFLFQTVVEGGVVE
NLSKRCGGFLKQLSLKGCENVEDKTLRVFSQNCRNLDRLNLYNCKKITDQTLISLGKNCP
QLHYLDTSSCTQITDQGLKHLGEGCPLLSHLDISWCDRITDRGIRHLTNGCPKLKHLLVK
GVTRLTDNSLENIAKNCPCLLLLNLHKCGNITDEGIQKLTEGCKNLESLNLSECLNLQDE
SLQSLSLHCHKLKTLEVALCSNLTDTGFISLAKSCPDLERMDLEECVQVSDKTLRYLSIH
CIKLTELTLSHCELITDEGIQDLGSGSCASEHLEVLELDNCPLITDNSLEHLVGCQNLSR
LELYDCQLITRAGINKLKATFPDLEVHAYFAPNSPAPSINNNNRSGRRKYCRCCILL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttggagccacttcgtaaaaagaaacgtagagtagaacattgtgattacgtgaacgag
gataaggaaaaccttgaagcttccgtgtccgcaatgtcgagtcgcacagagaacttcaag
caaaagttggaggagttcaaaactcgtcaagcattcctgccctcggagaatgaaggtctc
attaaccacaaactcccaaaagaattgttgcttcggatattctcatatctggatattgta
actttatgcagatgcgcacaggtgtccccatcatggaataacttagcactggatggcagc
aactggcaaagggtagacttgttcctgtttcaaactgtagttgagggaggcgttgttgag
aatttatccaagcgatgtggtggcttcctcaagcaattatcattgaaaggttgtgaaaat
gtggaggataaaacgttgagggtgttcagtcaaaactgtcgtaatcttgaccgacttaac
ttgtacaactgcaagaagataactgaccagacgcttataagccttggtaagaattgccct
cagctacattatcttgatacaagctcgtgtacacaaataactgaccagggacttaaacat
cttggagagggatgtcccctgttgtcccacctcgatatatcatggtgtgatcgaatcact
gatcgtgggatacgtcatctcaccaatggatgtcctaagctcaaacatttgcttgtgaag
ggagttactaggttaacagacaactcgcttgaaaacattgcaaagaattgtccatgtttg
ctgctgcttaaccttcataagtgtgggaacataacagatgaaggaatacagaaactcact
gagggttgcaagaacctagaatcacttaatctatctgagtgtttaaatcttcaagatgaa
tctttacaatcacttagtctgcattgccataagttaaagacattagaagttgctttgtgc
tcaaatctcaccgatactggatttataagccttgccaagagttgtcctgatttggagcga
atggatttagaagaatgcgttcaagtatcggacaaaacacttcgttatctatcaatacac
tgtatcaaactaacagaactgacgttatcccactgcgagttgatcacagatgaaggaatt
caagatcttgggtctgggtcttgtgcatcggagcacctggaagttctggaactcgataat
tgtcctcttataaccgacaacagtctcgagcatctagttgggtgtcagaatttgagtcga
ttggaactttatgattgtcagttgatcactcgagctgggattaataaactaaaggctact
ttccccgacctagaagtccacgcttattttgcccccaactccccagcgccctccattaac
aacaacaatcgttctggccggagaaaatattgcagatgctgcatattattgtga
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