Ciona intestinalis (yellow sea squirt): 100180474
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Entry
100180474 CDS
T01056
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100180474
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100180474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
Pyr_redox_2
zf-CW
HI0933_like
Thi4
FAD_oxidored
Pyr_redox
DAO
FAD_binding_3
GIDA
AlaDh_PNT_C
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
2-Hacid_dh_C
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
100180474
NCBI-ProteinID:
XP_026695851
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All DBs
Position
2:6612299..6640144
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AA seq
1071 aa
AA seq
DB search
MEPTSSSSNANNVRVSGRKAKRKTFDDFIPMNEWSLKPRKRRSIDSTGSAKHSNSDVIFT
ICNDNVEKAKTNAEFDVKDNSLKHLTEVASPKENHDKNDLKISLPEATKAVDAVDTKIGE
KFDKNFPINTAESAHDNKVEMTVNDKQTSDPILTKVSKPKRTPKARQSTKKEKLQPKKNV
SHYSRRTKVNADSNKKTEDEISEKEKLIFMNKHSCKKSGCKKIGLTCCIQATNACMEASG
KSSRWYHVSLEEHYCNGCFEEYYRIKHSGCDEFHEWKKAWMNNSKADANFKSLQTYISER
QLPYWVQCTQCGHWRSLTNDVELTSDVIRSYTCIMGNLANSLDESNSEDEDIRRVPHIKY
SCSQPNEQRVENALNPDLPWMNMLGCTPYLKHSPAAPFLTGYYPDGVGMSAVDTTNRRSL
SEFSSDENDVIKPPGLFNKINKHQVNSKSHLENKKYVSSKARGNVLTSPGGRKHNSKDPQ
IMVDGLNPYFQPFYKPHERGKALCMRPDVMELDEAEEFPEYYKEQTVYLAIRNLIVSLWT
LDPKRILTIRNCCEHLILRGLTRVRLCSLDAVRILQFATRKGLINTGALQLPKSVGNLKE
GTLPKVYSNQKVVVIGAGPAGIAAARQLHNFGCEVVCLEARLRLGGRVDDDWSLDGVCVG
RGAQIINGCVNNPLALVSQQLDLKMHRLLPRCDLYDAHKVATKSRALVKPVSVHCDKRMD
FHFNALLDIIVEWRQAQQDNAADCSLGEKIQEAHQEWIKQSGLNFTELEERLLNFHIGNL
EFACGASLDKVSAFHWDQNEVFAQFSGDHTFVQYGFGTQLSAIAYGLDIRFEQPVTDIIY
KNSMSKVEIKTKSETYEADRVLITVPLAVLRSGSIQFEPPLPPAKVASMNRLGCGCIEKI
GILFPKRFWDSKMDGANYFGYVPLSADEKGFFTVFYDVPYPQGEDSKVLMSVISGDCVDA
AKKMKDKEILDVALSVLRNVFSEKEVPEPSSYFVTRWNEDPYSQMAYSFVKKGGSGEDYD
EIAKSVAGRLFFAGEGTNRHFPQTVTGAYLSGLREASKIAIANKTDVQSSS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaactagtagttcaagtaatgcgaataatgtacgagtttccgggcgtaaagca
aagcgaaaaacatttgatgactttattccaatgaatgaatggtcactaaagccgagaaaa
cgaagatcaattgattctacaggctcggctaaacactccaactccgatgtgatttttacg
atttgtaatgacaatgtagaaaaggcaaaaactaatgctgaatttgatgtaaaagacaac
agtttaaaacacttaacagaagtggcaagtccaaaagaaaaccatgataaaaatgatctt
aaaatatcgttacctgaagctactaaagctgtggatgccgtagatacaaaaattggtgaa
aaattcgacaaaaactttccaattaataccgcagaatctgcacatgataataaagttgaa
atgactgtcaatgacaaacagacatcggatccaattttaacgaaagtttcaaaacccaaa
cgaactccaaaagctagacaatcaacaaaaaaggaaaaactgcaaccgaagaaaaatgtt
tctcactattcacgtcgaactaaggttaatgctgattcgaataaaaaaactgaagacgaa
atttctgagaaagaaaaactgatctttatgaacaaacattcctgtaagaaaagcgggtgt
aagaagataggattaacgtgctgcatacaagctacaaacgcatgcatggaagcttctgga
aagtcttcacgttggtaccatgtctcattagaagaacattattgtaatggatgctttgaa
gaatattacagaattaagcattctggttgtgatgagttccatgaatggaaaaaagcatgg
atgaacaacagcaaggctgatgccaactttaaaagtttacaaacatatatatctgagaga
caactgccttactgggttcaatgcacacaatgtgggcattggcgatcactgactaatgat
gttgaactaacgtccgatgttattcgctcttacacttgtatcatgggaaatctagctaac
tcattagatgagagtaatagcgaagatgaggatataaggagagttcctcacataaaatac
tcgtgctcccaaccaaacgaacagcgtgttgaaaatgctcttaaccccgacttaccatgg
atgaatatgctgggttgtaccccatacctgaaacacagccccgcagccccatttctaaca
gggtattaccctgatggtgtgggtatgagtgcggtggatacaacaaacagaagatcattg
tccgagttttcctccgatgagaatgatgtcattaaacctcctggattgtttaataaaata
aacaaacaccaggtgaacagcaaatctcaccttgaaaacaagaaatatgtttcatcaaaa
gctcgcggaaatgttttaacttcacctggtggtaggaaacataacagtaaagatccgcaa
ataatggtggatggattaaacccttacttccaaccattctataaaccacatgaaagaggc
aaggcactgtgcatgaggcctgatgtcatggagctagatgaggcagaggaatttccggaa
tattacaaggaacaaacggtgtatctcgctattcgaaatcttatagtgtctctatggacg
cttgatcctaaaagaattcttaccatccgcaactgttgtgaacaccttatactacgaggt
cttacgcgagtgaggttatgttcattagatgctgtgagaatcctacaatttgcgaccagg
aaaggccttattaacacgggagcattacaacttccgaagtccgttggtaacctgaaagaa
ggaactttaccgaaagtttacagcaaccaaaaggttgttgtcatcggggcaggtcctgcg
ggcattgcggccgctcgacagcttcataactttgggtgtgaggttgtttgtttggaagcg
aggttgaggctcggaggaagggttgatgatgattggtcactagatggcgtatgtgtgggc
aggggagcgcaaattattaacggctgtgtgaacaatcctcttgccttggtgtcgcaacag
cttgatttaaagatgcatcgattattgccgagatgtgatctctatgacgctcacaaggtg
gcaacaaagagcagagcgctggtgaaaccagtgtcggtacattgcgataaaagaatggat
ttccatttcaatgcattgttggatataatcgttgaatggaggcaagcgcaacaagataat
gccgcagattgctcacttggagagaaaattcaggaagcccaccaggaatggatcaaacaa
agtggtttaaacttcaccgaacttgaggagaggttgctcaactttcatatcgggaatctt
gagtttgcatgtggcgctagtttggataaggtttcagcgttccactgggaccaaaacgaa
gtatttgcacagttcagtggggaccatacatttgtacagtatggatttggtacccaactt
tcagccattgcttatggacttgacatcagatttgaacaaccagtcacagatattatttat
aagaactctatgagtaaagttgaaattaagacaaaaagtgaaacatatgaagcagacaga
gtattgattactgtaccactagctgtactaagatctggttcgatccagtttgaaccgcct
cttccaccagcaaaggtggcttcaatgaacaggttggggtgtggatgtattgaaaagatt
ggaatcttatttcctaagagattctgggatagtaaaatggatggagccaattatttcggt
tacgttccattatctgctgatgaaaaaggtttcttcaccgttttctatgatgtcccttac
ccacagggtgaagatagcaaagtcctgatgagcgtaatatcaggagattgtgttgacgca
gccaagaaaatgaaagacaaagaaattcttgatgttgcgctctcggttttacggaatgtg
ttttccgaaaaagaggttccagaaccttcaagttactttgtcactcggtggaatgaagac
ccatattcgcagatggcatatagctttgttaagaaagggggaagtggggaagattatgat
gaaatcgcaaagtctgttgctggtagattgttctttgcaggagagggcacgaaccgacat
ttcccacaaacggtcacgggtgcctacctcagtgggttgcgtgaagcttccaaaatagcg
atcgctaacaagaccgacgtacaatcttcatcgtga
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