Ciona intestinalis (yellow sea squirt): 100180482
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Entry
100180482 CDS
T01056
Name
(RefSeq) structural maintenance of chromosomes protein 2
KO
K06674
structural maintenance of chromosome 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100180482
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
100180482
Condensin II
100180482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
ABC_tran
AAA_18
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
100180482
NCBI-ProteinID:
XP_002119958
Ensembl:
ENSCING00000000171
UniProt:
F6YYE4
LinkDB
All DBs
Position
8:complement(6379528..6395377)
Genome browser
AA seq
1202 aa
AA seq
DB search
MYIKSVTVDGFKSYAQQTDIKGFDPLFNAITGLNGSGKSNILDAICFLLGITNLSQVRAT
NLQDLVYKNGQAGINKATVCITFDNSNKEQSPMGMEAHNEITITRQIVIGGRNKYLINGV
NAQNSRVSDLFRSVGLNVNNPHFLIMQGRVTKVMNMKPPEILSMIEEATGTSMYESKKDS
AQKMIEKKENKLNQINRTLDEEITPTLQKLHDERSSYLEFQKVQREVERLSRLLIAHQFV
SVERIANNASGEIEEMDEEKEKLEQEFHRLQEKYHSMGRDITDLENVLDKDSRAKVELES
SLGREEKIEAKVQSNLANQREVINSEKRKLKGLSKSKSECESAIRNKTKALENLRLLCEK
AEHESSKMNEEYAAAEKHFQAVTTGLATSDTGEEASWQAQLLQVKKDISQLQTDTKQSEM
KLKHNKQELKAKQTELKKTEASYKQDQDGLKKMERSYAEIQKQMDKLNYNEGAEEELKSR
KQELSTKIQRMSRLTQGLYNKFPNLQFNYRDPEANWDRARVKGLVANLVDVKDVTHATAL
EVVAGGRLYNVVVDNHETGAKLLKNGQLKRRCTIIPLNKVAARTINREVVSHAKSLVGQN
NVNLALSLVGMDDEIRKALEYVFGGTLVCDTMENANKVAFNPNVKTRTVTLAGELFDPSG
TLTGGARPKVTPVFAELKEIKSTMNELHNAKREYASIENKLHDVARVSGRYHDLKNQATI
KEREIETVKQRISTTSHGRLLEEIERLQKSIDECSETLDTAKDRFGEMHQHCVELERKIA
NAPAERERELKEAEMKMNKVGEAAEKAGKLADAKKEELNTMTLEVQELEKEVAECEDQIS
RVETLINDAQDIYGKIKETVEAAVESVKAAKLELQKHRDHIQAMSHDMQQRTKDRENVLH
EVGQCKRKLIDQRNAIEKCHRESNDATNKVASMLEEHDWINNEKSLFGKPSSPYDFNANP
PKEATRRLDKLKERQEKLSHSVNMRAMSLLGKAEEKYKELIKKKNIVENDKQKIQRTIEE
LDQMKNKAVTKAYVQVNKDFGEIFSTLLPGATAKLAPAEGSSVLAGLEFQVGFGDVWKTN
LNELSGGQRSLVALSLILAMLLLKPAPIYILDEVDAALDLSHTQNIGGMLREHFKRSQFI
VVSLKDGMFNNANVLFRTKFVDGVSTVARFTQSTQSRNPLSALPVTTTDVPNSRKRAKPT
QT
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaagagcgttacagttgacggatttaaatcctacgcccagcaaaccgacata
aaaggattcgatcctctatttaacgcaataactggacttaacggaagcgggaagtcaaat
atattggatgcaatttgtttcttgttgggaattactaatctttcacaggtccgagccacc
aacctccaggatcttgtgtataagaatgggcaagctgggatcaacaaagccaccgtctgc
atcacattcgacaacagtaacaaggaacaaagcccaatggggatggaagctcacaatgaa
ataactatcacgagacagatagtgatcggaggacgaaataaatatttgatcaacggggtg
aacgcacaaaactcgagggtctccgatttattccgatcggtcggtttaaacgtgaacaac
ccgcattttctcatcatgcaaggtcgtgttacaaaggtaatgaacatgaagccacctgag
atcttatccatgatagaggaagccactggtacgagcatgtacgagtctaagaaggactcg
gcgcaaaagatgatcgagaagaaggaaaacaaactcaaccagataaaccggacattggat
gaagagatcacaccaactctccagaagttgcacgacgaacgatcctcgtacttggagttc
cagaaggttcagcgggaggtggagagattatcccgtctacttatcgcgcaccagttcgtg
tcagtggagcggatcgctaacaacgcatctggggagatagaagagatggatgaagagaag
gagaagttggagcaagagttccaccgactgcaagagaaataccacagcatgggaagagac
atcacagacctagagaacgtattagataaggattcgcgtgccaaggttgagttggaaagt
tcacttggtcgagaggaaaagattgaagcgaaagttcaaagcaacctcgccaaccaacgt
gaagttatcaacagtgagaagagaaagctgaaagggttgagtaaaagtaaatctgagtgt
gaatctgccatccgcaacaaaacaaaagccttggaaaacttgcgcctgctttgtgagaaa
gctgaacatgagagctcgaagatgaacgaggaatatgcggctgcggagaaacatttccag
gcagtaacaacaggtctagccacctcggacaccggtgaagaagcatcatggcaagctcaa
ctgttacaagtgaagaaagatatcagccaacttcaaacggataccaaacagagtgaaatg
aagttaaaacacaacaaacaggaattaaaagccaaacaaactgaactcaagaaaactgag
gcaagttacaaacaagaccaagatgggttgaagaagatggaacgtagttatgcagagata
cagaaacaaatggataagttaaactataacgaaggagcagaagaagaattaaaatctcgc
aaacaagaattatcgaccaagatccagcgcatgagccgacttacacaaggactttataac
aagtttcctaacctacagtttaactacagagatcctgaggcaaactgggacagagctcga
gtgaaagggttagtagcgaacctggttgatgtgaaggatgtcacccatgctactgcatta
gaagtggtagctggtggaaggttatacaacgtggttgtcgacaaccatgaaactggagcc
aaactcctcaagaacggacaacttaaacgtcgatgtaccattatacctttgaataaagtg
gctgccaggaccattaatagagaggttgtctcccacgccaagtccctggttggccagaac
aacgtgaacctcgccctctcattggttggtatggatgatgaaatacgtaaagcgcttgaa
tatgtgtttggtggaacactggtgtgcgataccatggaaaacgctaataaggttgcgttc
aaccctaatgttaaaacccgcaccgtcacccttgctggtgagttgtttgatccatcgggc
acgttaaccgggggtgcacgacctaaagtaacccctgtgttcgctgagttgaaggaaatc
aagtcaacaatgaatgaactacataatgctaagagagaatacgcttcaattgagaacaag
ttgcatgacgtggcacgtgtcagtggacgataccacgacctcaagaaccaagccactatc
aaggaacgcgagattgagacggtgaagcagaggatatcaactacttcacatgggagactg
ttggaggaaattgaaagattgcaaaagtctatagatgagtgcagtgaaacgttagacaca
gcaaaagatcgcttcggtgagatgcaccaacactgcgtagagttggaacgaaagatcgca
aacgcaccagctgagcgagaacgcgagttgaaagaagccgagatgaaaatgaacaaagtt
ggtgaagctgcggagaaagctgggaagttggctgatgctaagaaagaggaattaaacacg
atgacactcgaggtccaagaattagagaaagaagttgccgaatgtgaagatcaaataagt
cgcgtggaaactttgatcaatgacgctcaagatatttatgggaagattaaagaaactgtg
gaagctgctgtggagtctgtgaaagctgccaaactcgagctccagaaacatagagatcat
atacaagccatgtcacatgacatgcaacagcgaaccaaagatcgagagaatgttcttcat
gaagttggtcaatgtaagaggaagttgatcgatcaaagaaacgcgatcgagaaatgtcat
cgggagagtaacgatgcaacgaataaggtcgcctctatgttggaggaacacgactggatc
aacaacgagaagtctttattcggtaaaccaagttccccctatgatttcaatgccaaccca
cccaaggaagcaacacgaaggttggataaactgaaggaaaggcaggaaaaactaagtcat
tctgtgaatatgagggccatgagtttgctggggaaagctgaggaaaagtacaaagaattg
attaagaagaagaatattgtggagaacgacaaacagaagatacaacgcacgatagaagaa
cttgatcagatgaaaaataaagcagtcacgaaagcttatgtgcaggtaaacaaagacttt
ggcgagatattctccactttgctaccaggagctacagctaaacttgcaccagcggagggc
agtagtgtgctagcagggttggagttccaggttgggttcggcgacgtttggaaaactaac
ttgaacgaacttagtggtggacagaggtcactggttgctctgtccttgatcctagccatg
ttactccttaaacccgcccccatatacatactggatgaggtggacgctgcattagatttg
tcgcatacacagaacatcgggggaatgctacgtgaacatttcaagcgctcacagttcatt
gttgtgtcgttgaaggacgggatgttcaataacgccaacgttttgttccgaacaaagttt
gtcgacggcgtttccaccgttgcccgtttcacgcaatccacacagagtagaaacccgttg
tcagctttacctgtcactacaacagatgtcccaaactctcgtaaacgagccaagcctaca
caaacttag
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