Ciona intestinalis (yellow sea squirt): 100180536
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Entry
100180536 CDS
T01056
Name
(RefSeq) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00511
Other glycan degradation
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
100180536
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100180536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100180536
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
100180536
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100180536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-GeneID:
100180536
NCBI-ProteinID:
XP_002131484
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All DBs
Position
1:7934664..7938711
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AA seq
481 aa
AA seq
DB search
MNIAVLVVFALYVTVCVSQSFVRDEVPIGEKTSKHRLEQNTLASKPIFKKKYEPTWESLD
SRPLPEWYDQAKFGIFIHWGVFSVPSFVSEWFWWYWKETRQKNVVDFMEKNYPPHFTYAD
FAKDFTAELYDPDQWADLFKESGAQYVVLTSKHHEGYTNWPSNVSWNWNSMDVGPHRDLV
GELANSIRNRTYLKFGLYHSLFEWFNPLYLADKASNFTTRRYATEKSIQELYELVNTYKP
DIVWSDGDPGPVEYWNSTGFLAWLYNDSPVKDMVVTNDRWGAGCMCKHGGYFTCQDRYSP
GVLQHHKWENCMTIDRYSWGYRRNANIQDFLTIEEIISTFASTISCGGNMLMNVGPTKDG
MIAPVFQDRLREFGSWLKVNGEAVYSSKPWRSQNDSVTPNIWYTEKPGTVYTFVLSWPKS
NWIELGEPVPGNSTNEISLLGHKGLLEWYIRNSLLHIRMPNLNTSDLPCKWAWVLRLSGF
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcggtacttgtagttttcgctctgtacgtaacagtttgtgtaagtcagtca
tttgtaagagatgaagttccaatcggcgaaaaaacatcaaagcaccgattagaacaaaat
acacttgcaagtaaacccatttttaagaagaaatacgaaccaacatgggaatctctggat
agcaggccgctaccagaatggtatgatcaagcaaaattcggtatctttattcactggggt
gtgttttctgtcccaagcttcgtcagcgagtggttttggtggtattggaaggagacacgc
cagaaaaatgttgtggatttcatggagaaaaactacccccctcattttacttatgctgat
tttgcaaaggactttactgcagaactgtatgaccctgatcagtgggcagatctatttaaa
gaatctggtgcacagtacgttgtcctaaccagcaagcaccatgaaggttacaccaactgg
ccttccaatgtttcatggaattggaactcaatggatgttggaccacatcgtgatttagtt
ggagagctggcaaactctataaggaatcgaacatacctgaaatttggtctctaccactca
ttgtttgagtggtttaacccattgtacttggcggacaaagcatctaatttcacaactcgg
cgttacgcaactgaaaagtccatccaggagctgtatgagttggttaatacatataaacct
gacatagtgtggtcagatggtgacccaggacctgttgaatattggaactcaacaggattt
ttagcttggctttacaatgatagtcctgtgaaagatatggttgtgaccaatgatcggtgg
ggtgcgggttgtatgtgcaaacatggtggctacttcacatgccaagacagatacagccct
ggtgtgttgcaacatcataaatgggaaaattgcatgaccattgatcgttattcatggggt
tatagaaggaatgcaaacatacaagactttcttacaatagaggagattatttctacattt
gcttctaccatcagttgtggtgggaacatgttaatgaatgtagggccaaccaaagatggt
atgattgctccagtgtttcaagatagactgagggagtttggaagttggcttaaagtgaat
ggtgaagctgtttattcaagcaaaccttggaggtcacagaatgattctgttaccccaaac
atctggtacactgaaaaacctgggactgtttacaccttcgtgctttcttggccaaaatct
aattggattgagcttggcgaacctgttcctggaaattctaccaatgaaataagtttgctt
ggccataaagggttactagaatggtatattagaaattctttacttcatattcgaatgcca
aatttaaatacctcagatttgccatgtaagtgggcatgggtgttaaggcttagcgggttt
gtttga
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