Ciona intestinalis (yellow sea squirt): 100180615
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Entry
100180615 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100180615
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100180615
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
100180615
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Gp53-like_C
Motif
Other DBs
NCBI-GeneID:
100180615
NCBI-ProteinID:
XP_026692035
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Position
10:2712571..2728933
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AA seq
1160 aa
AA seq
DB search
MAFTTTQLAWSLLEFRNAYLASHQISNVMNALKWATDYFIKCHVSEFEFYGQVSNSDIDD
VYWGRPEDLTGSRPSYKITREKPGSELAAETAAAMAATAIVFNNTGTNYSSILLQHAREL
FNFARLHNGTYHDGIPQAKKYYKSWSGYWDELSWAAAWLYKATNEEQYLTLSKYYIEYNP
DESAMTTFSWDDKRPGATFLLAQITEEYRYIDQVSDFCDSLLPGRGPAYTPKGLLYISEW
GPNRHAANTGFLCMLATKIGLRRDIYQNFAYQQLSYILGEGGRSFVVGFGNNSPDRPYHR
ASSCPSPPAACSWDNKDTDAPNPHTLTGALVAGPDRWDAFSNVRSDTKHNSVSIDFNAGL
QSLAAGILEIQVTGQTFSEPNPEELLSAISETFSIRHDYNEVLRKSLLFYEAQRSGELPA
NNRILWRKSAFIDDRGLNGEELSGGYFDAGDYVKFNFPMAFTTTVLSWGVLLYADAYNET
NELENAREAIKWATDYFIKCHVSKFEYYGQVGEGRIDHVFWRSPPRNERRRAFKLTRSAP
GSEVIAETAAAMAAASMVFSQVNASYSQELLSHARDLYEFADTYREMYHRSIRDAGNFYR
SYAGYNDELTWAAAWLYSATNENQYLVDAQAKYTEFNLASKKPSGFHWEDKIAGVQLLMA
QNTRNETYKVHVEQFCDRFLPGAEFPYTPKGLVYIQEWGVLRHAAGVAFICMAAADLGIK
QNLYRDFAKRQIHYMLGDSGLGSYVIGYGPNPPTRPHHRASSCPIPPEPCSFTALRNPGS
NPHILVGALVGGPDGNDRFHDDRQNHRSSEVALDYNAAFQSAIAGLRYQELHPPVTTTTS
NPDITTTPAPYVSVTSNNTDYVDIDNYGLISDVDLMRELDLNLGGFDYSDLLATTESSIN
QTENATIDVTTAQTTTQLQTTQAVTTEALTTTSETTTIATTTAQTTIQTTTTSASASPTV
SPRVITPPTTTTITTSTVSAGETDCVAFNIFDTCAAQGLVGNNRNLCRIRSFRGCANRLG
SACHSLWAVWPVWNNDHASNDHWFSEEEQQCQSNSVERQNCLLRGLTSAFEDCLLVIQNQ
IGIAARKCRWQRYQECVNNLVGHCPLTWQTWDLWNTRDTGNPRFSEPQRTCNNAGSQVVF
TWSYMLLSLYLSLHMTYQVF
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaccaccacacagcttgcatggagtttgcttgagtttaggaatgcttatctt
gcttctcaccaaatatctaatgtgatgaatgcacttaagtgggctacggactattttatt
aagtgtcatgtttccgaatttgaattttatggacaggtctctaacagtgacattgatgat
gtgtattggggaagacccgaagatttaacagggagtcgtccttcatataaaataactcgc
gagaaacccggctctgagttggctgctgaaactgcagctgcaatggcagcaactgctatt
gtgttcaacaacacagggacaaactattcaagtatattgcttcaacatgcaagagaattg
ttcaactttgctcgtttacataatggcacgtaccatgatggtatccctcaagccaagaaa
tattacaaatcctggagtggatactgggacgagttatcatgggcggcagcatggttgtac
aaagcaaccaacgaggaacaatatttaacgttgtccaaatattatatcgagtacaaccct
gatgaatcagccatgacaacttttagttgggacgataaaagaccaggagcaaccttcctg
cttgctcaaataactgaggagtacaggtatattgaccaagtcagtgacttctgtgatagc
ttgctgcctggaagaggtccagcttatactccaaaaggtttgctctacattagtgagtgg
ggaccaaacagacacgctgcaaatacggggttcttatgcatgttggcaacgaaaattgga
cttcgaagagacatttatcaaaactttgcctaccaacagctttcatatattcttggtgag
ggtgggcgtagttttgttgttggttttggcaacaactcacctgatcgaccataccaccgt
gcaagttcgtgtcccagcccccctgcagcgtgttcatgggacaacaaggatacagacgca
cctaaccctcatacactaactggtgctcttgtagcaggaccagacaggtgggatgcattt
tcaaatgttcgttccgacacaaaacacaattctgtttccattgattttaatgctggcctt
caatctcttgctgctggaatattggaaatacaggtcactggtcaaacgttttccgaaccc
aaccccgaagaactactttctgcaatttccgaaactttttcgattcgacacgattataat
gaagtattaagaaaatcacttctattttacgaagcacagagatctggagagttgccggca
aataaccggatattgtggagaaaatctgcgtttattgatgaccgtggtttaaatggggaa
gaattaagtggtgggtattttgatgctggcgattatgtgaagttcaatttcccaatggca
ttcaccacaactgtgttatcatggggtgttctgctatatgcagatgcttataatgaaaca
aacgagttagaaaatgcaagagaggcaattaaatgggcaactgactacttcataaagtgc
cacgtcagcaaatttgagtattatggacaggttggtgaaggacgtatcgatcacgttttc
tggagatccccacccaggaatgaacgaagaagagcgtttaaactcacgcggtctgctcct
gggtccgaagttattgccgaaactgctgctgccatggctgcagcttctatggttttcagt
caagtaaatgcgtcatactctcaagagcttttaagccatgcaagagacctatatgagttt
gcagatacctatagagaaatgtaccacaggtctataagagatgctggtaacttttaccgc
tcatatgctggatataatgatgaacttacatgggcagctgcatggttatattctgctacc
aatgaaaaccaatatctggtggatgcgcaggcaaaatacactgagtttaatttggcaagc
aagaaaccaagtggttttcactgggaagacaaaatagctggcgtccaacttctaatggct
cagaacacaaggaatgaaacttacaaggtccacgttgaacagttttgtgaccgttttcta
ccaggagcagagtttccgtacacaccaaagggacttgtatacatacaagagtggggcgtt
ttacgtcatgcagcaggtgttgcatttatttgcatggcagctgctgacttgggtatcaag
cagaatttgtacagagattttgccaagcgacaaatacactacatgcttggtgacagtggt
cttggaagttatgtgattggatatggacctaaccctcccaccagacctcaccacagagca
agttcatgtccaatcccaccagaaccttgcagttttactgcattgcgtaaccctggcagt
aacccccacatattagtgggtgcattagttggaggtccagatgggaatgatagatttcat
gatgataggcagaaccacaggagctcagaagttgccttagattacaatgcagcttttcaa
tctgccattgctggccttcggtaccaagaactccaccctcctgtaacaacaacgacaagc
aaccctgatattaccacaacaccagctccatatgtttctgtgacttccaacaacacagat
tacgttgatattgataactatggcttgataagtgatgttgatttaatgagggagctagat
ttaaacttaggcggcttcgattacagcgatttacttgcaacgacagaaagttcaataaat
caaacagagaatgcaacaatagatgtaacgactgctcagacaacaacgcaactacaaaca
acacaagctgtaacaactgaagcactaactactacaagtgaaacaacaacaattgcaact
acaacagctcaaacaactattcaaacaacaacaacaagtgcttctgccagtccgacagtg
tcaccaagagttataactccaccaacaacaacaacaataacaacaagcactgtatctgct
ggtgaaactgattgtgttgctttcaatatatttgacacctgtgctgctcaaggacttgtg
gggaataacaggaatttatgtcgaatcagatctttcaggggctgtgctaatagactggga
tcagcatgtcatagtttgtgggcggtgtggccagtatggaataatgatcatgcatcgaat
gatcactggttttctgaagaggaacagcaatgccagtctaactcagttgaaagacaaaac
tgcttgttgcgagggcttacatcagcatttgaagattgtttacttgttattcaaaaccaa
attggaatcgcagcaagaaaatgcagatggcagagataccaggaatgtgtgaacaatctg
gttggccattgccctttaacatggcagacatgggatttatggaacactagagatactggc
aatccacgcttcagtgaaccacaaagaacatgcaataatgctggaagccaagttgttttt
acatggagttatatgctgctgtctttgtacctttctctacacatgacttatcaggtgttt
tga
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