Ciona intestinalis (yellow sea squirt): 100180616 Help Entry 100180616         CDS       T01056                                  Name (RefSeq) tonsoku-like protein   KO K09257   NF-kappa-B inhibitor-like protein 2 Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cin03000]     100180616    03400 DNA repair and recombination proteins [BR:cin03400]     100180616 Transcription factors [BR:cin03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    RHR (Rel homology region) Ankyrin only     100180616 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      100180616 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ank Ank_4 Ank_2 Ank_5 Ank_3 TPR_12 TPR_8 TPR_1 TPR_7 LRR_6 LRR_8 LRR_4 Peptidase_M13 LRR_At5g56370 LRR_NXF1-5 Ank_KRIT1 Motif Other DBs NCBI-GeneID:  100180616 NCBI-ProteinID:  XP_018671086 LinkDB All DBs Position Unknown AA seq 1185 aa AA seqDB search MNSKLKEIKKYQKLRQKSQESNNLKEEAEVCNVLGNLFLETGDTTEALSMHQNELALCGL LHDVVGQAVAHRKIGDVFVSKGNYTSAIKHHTLHLELACKVEDKVEMQRANTSLGRTYLD KSSLPSTSDMEIEDLLGRSIKLFNESLRLVGEVKVGTTEFVEMKVRSYINLGLAHHQLNI INHNTNEAARSVGCFEKALSLAETHNNTDDLYLTHQVLVGVNIELVKHSVALKHAEAMLK LAKQTKRLESIDSSSELCAETHLQLGNIHSAKDYLKRIYLKTKQNSLRDETESKLKTVIK MCRISHELTTEETSVNRKYSLHEAIADLFCKLRCFEPALKHYKAQESTLDDIEGITNKQR KLVYFSIASTLVDLKRYNEAIEYFYNEINVTSESTDHVDIYINISRCLEGVGKSYHEVKG VCTKSMKCAEDCGSDHLKMKALVRREEIETKFNDVEAADVTKSEISMLELKVGEIDEGSE TITDCYNSCPLDDSMEMLEEELAIPLKDDEVTRRSKRALISKQNCLGETGLHQACIGGDL KRVQLLIKQGHQVNPRDFCGWTPLHEASNHGHEDIVEYLLQHGAHINDLGGEGCGNLTPI HDAANNGHFNVVEILLNHNANPFIANNEGLNVLATLRKYRDKYGDEMDEKQRSLCDAVCR RLEERKDQHHVVDPPIIIRDATVDVSSSPPNIDDVITDDVTDNDITDNVTTHDVTTCDVT TDDVITEYRSSITSLGSSRRRKSFPVHHKRSVPALVERSADDPWLVEDVDPPRKKRRFLD GGSWDAGKRTKITDYCSEVPRSRDDVVVNVEYRDEDIRLDVLDQGRVTTSSMRVKVEIED FSFFVAVPPDKPVSWLNEVATSCYERNHRVSPTIQLSCDDVLMMNEDLVSVVVRNNDVIK GVVMSWNIPLLSERYVKYCQQTNIAEIPRITNACKDCAISKSLEIESLRFPQHLKPLFLN LRKQEITKINFSGCRIGWEGVKCLCENVQQPFNSTLTHVNMSCTAMNDHAMSILSQTPSF HNLTHLNTSFNPLCTVDGLFGLLSNCPNLRELNVQCCQLRMVGRQHMFDAGLPSLEVLNI SQNNFGATGLKHWLKLLHRNQIKSLNIQGVSDTNNNKDLTRILIDFLETSNKKLNFLNLS ENQLHDDIIRSFDAFVDESNSTDGVPSFITTHKRCHCHKTMNFQP NT seq 3558 nt NT seq  +upstreamnt  +downstreamnt atgaactcgaaattgaaggaaattaaaaaatatcaaaagttacgacaaaagtcacaagaa tcgaacaaccttaaggaggaggctgaagtgtgtaatgtgttggggaaccttttccttgag acaggcgataccaccgaagctttgtcgatgcatcagaatgaacttgcgttgtgtggattg cttcatgatgttgtgggacaagcggtggcgcataggaagattggtgatgtgttcgtatcg aagggtaattacacctcagccatcaaacaccacacgttgcatctcgagttggcttgtaag gttgaggataaagttgaaatgcaacgagccaacacctcacttggacgaacatatctcgat aaatcgagtcttccttcaacttcggatatggagatagaagacttgctggggagatccatc aagttgtttaatgaaagcttgcgattggttggtgaggtaaaggtcggtacgacggagttt gttgaaatgaaagttcgaagttacatcaaccttgggctggctcatcatcaacttaacatc atcaaccacaacactaacgaagctgcgaggagcgttgggtgttttgagaaagctttgtcg cttgctgaaacacacaacaacacggatgatttatatttaacgcaccaagtattggtcggg gtgaacattgagttagtgaaacacagtgttgccttgaagcacgcagaagcgatgttaaag ttggccaaacaaaccaagaggttggaaagcatcgattcatcgagcgagctttgcgcagag acacatcttcaacttggtaacatacattcagccaaagattatttgaagaggatttattta aaaacaaaacaaaattcgcttagagacgaaactgaaagtaaattgaaaactgtaatcaag atgtgtcgaatcagccacgaactaacaactgaagaaacttcggtgaatcgtaaatattcg ctgcatgaagcaatcgctgatttattttgtaaactccggtgttttgaaccagcgttgaaa cattacaaggcacaggaatctactttggatgatattgaagggatcacaaacaaacagagg aagttggtctacttttccatcgcatcaactttggttgatttgaaacgatataacgaagct attgaatatttctataatgagataaacgtaacatctgaatcaaccgatcacgttgatatt tatatcaatatatcccggtgtttggagggggtgggtaaaagttaccacgaggtcaagggg gtgtgtacaaagtcgatgaaatgtgcggaagattgtgggagcgaccatttaaagatgaaa gctttggttcgtcgagaggaaattgaaacaaagtttaacgacgtggaagcggccgatgtc accaagagtgagatttctatgctggagttgaaagtcggggaaattgacgaaggttcggaa acgataacggattgttacaatagttgtccactagatgacagtatggagatgttggaggaa gaacttgcaatcccgttgaaagatgacgaagtgacgcgacgatcaaaacgtgcgttgata tcaaagcagaattgcctcggggagacggggttacatcaagcttgtatcgggggcgatctt aaacgggttcaacttcttattaaacaaggtcaccaggtgaatcctcgtgatttttgtggt tggactccgttacatgaagcaagtaaccatggacatgaagatattgttgagtatttgttg caacacggagcgcatatcaatgacttaggtggggaaggttgcgggaatcttaccccaatc cacgatgctgctaacaacggacatttcaatgttgtcgagatattattgaatcataatgcc aatccattcattgctaacaatgaggggttgaacgtgttggcaacgttgcggaaatatcgc gataaatacggggatgagatggatgagaagcaacgatcattgtgtgatgcggtgtgtagg aggttggaggagaggaaggatcaacatcatgtggttgatcctccaataatcatcagagat gcaacggttgatgtctcctcctctcctcccaacattgatgatgtcatcactgatgatgtc accgataatgacatcactgacaatgtcaccacccatgatgtcacgacctgtgatgtcacc accgatgatgtcatcaccgagtatcgatcttccatcacatccttggggtcgtcacgacga cgaaaatcctttcccgtccatcacaaacgatccgtccccgcactagtggaacgatcggct gatgatccttggttggtggaggatgttgatcctcccaggaagaagaggagattcctggat ggaggatcctgggatgcggggaagagaaccaagatcacggattattgtagtgaggttcca agatcacgagatgatgttgttgttaacgttgagtatcgggatgaagacatcagacttgat gtgttggaccaagggagggttaccacttcaagcatgagggtcaaagttgaaatcgaagac ttctcgtttttcgttgccgttcctcctgacaaacccgtttcgtggttgaacgaggtcgcg acatcgtgttacgaacgcaaccaccgggtgtcaccaacaatccaactctcgtgcgacgat gttttgatgatgaacgaggacttggtgtcggtagtagtgcgcaataatgatgtcataaag ggagttgtgatgtcatggaacataccattgttgtcggaacgttacgtcaaatattgtcaa caaaccaatattgctgaaataccgaggattacgaacgcttgcaaagattgcgcaatctct aaatcgctggaaattgaatcgttaagatttccccaacatctcaaacccttgtttttaaat cttcgcaaacaagaaattacgaaaattaatttctctggttgtcgtatcggttgggaggga gtgaaatgtttgtgcgagaatgtccaacaaccttttaactcaacgctcacgcacgtgaat atgagttgcacggccatgaatgatcacgccatgagcatattatcacaaactccatcgttt cataacctcacccatctaaacacctcgttcaaccctctttgcaccgtcgatggattgttt ggtttgttgtcaaattgccccaaccttcgtgagcttaacgttcaatgttgccaactacgg atggtcggtcgtcaacatatgtttgatgccggtttacccagccttgaagttttaaatatt tctcaaaataattttggggcaactggtttgaaacattggttgaaactgcttcatagaaat caaataaagtcgttgaatattcaaggagtttcagacacgaacaacaataaagatttgacg aggattctcatagattttcttgaaacttcaaacaaaaaattaaattttctcaatttgtcg gaaaatcaattacatgatgatatcataaggtcgtttgatgcgttcgttgatgagtcaaac tcgaccgatggagttccttcgtttattacgactcacaaacgatgtcattgtcataaaaca atgaactttcaaccataa

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