KEGG   Ciona intestinalis (yellow sea squirt): 100180662
Entry
100180662         CDS       T01056                                 
Name
(RefSeq) charged multivesicular body protein 6-B-like
  KO
K12195  charged multivesicular body protein 6
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03250  Viral life cycle - HIV-1
cin04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100180662
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100180662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100180662
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100180662
Membrane trafficking [BR:cin04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100180662
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100180662
  Exosomal proteins of other body fluids (saliva and urine)
   100180662
SSDB
Motif
Pfam: Snf7 Cas_Csa5
Other DBs
NCBI-GeneID: 100180662
NCBI-ProteinID: XP_002126126
Ensembl: ENSCING00000014946
UniProt: F6VKK3
LinkDB
Position
10:662424..663321
AA seq 204 aa
MGNLFSSKPKPKPSRVTPQDRAILELKKQRDTLRTYQRKIENDQEVLKRLAKQCLKDGNK
NKAKLLLRKKKRQETLMTQTEQQIDNLEVMANDIEFAQLESNVFEGLKVGNESLKAMHKL
MSYEDVEKIMEETQEGIEYQRELDELLAGSVTQEDEESILAELDDLVGDKEKIQNLPDAP
TDELEQKTEARKEKKQERTLLEAS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgggaaatttattttcatctaaacctaaaccaaagccgagtcgagtaactccgcaggac
agggcaattctcgagttaaagaagcaacgagatacgttaagaacgtatcaaagaaaaata
gaaaatgatcaagaagtactaaaacgactggcaaagcaatgtcttaaagatggcaacaaa
aataaagcaaaattgttgctaagaaagaagaaacgacaagaaacactgatgacacaaaca
gaacagcaaattgataacttagaagtgatggcaaacgacatcgagtttgcccaactggaa
tcaaatgtctttgagggtctcaaagttggaaatgagtctttaaaagcaatgcataaactc
atgtcgtatgaggatgtggagaagatcatggaagagacacaagaagggattgaataccaa
cgagaacttgacgagcttcttgctggatctgttacacaagaagatgaggaatcgatcctc
gctgagttggatgacttggtaggagataaagagaagattcagaatcttccggatgcccca
actgatgagctggaacagaaaactgaagctaggaaggaaaagaaacaagagaggacattg
cttgaagcttcttaa

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