Ciona intestinalis (yellow sea squirt): 100180764
Help
Entry
100180764 CDS
T01056
Name
(RefSeq) vacuole membrane protein 1 isoform X1
KO
K21248
vacuole membrane protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100180764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VTT_dom
MscL
DUF6608
Motif
Other DBs
NCBI-GeneID:
100180764
NCBI-ProteinID:
XP_002126237
Ensembl:
ENSCING00000008648
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MGNNKLNGSSRLAHDTVMQELKQKDREERSKLVIWKQPITTLQYFTLECISKLHKASIKL
REKKLTVAVFTILSILTYLLCVTQGPHSEYFSSWSKVIAWCGYWVGLGILSSVGLGTGLH
TFLLYLGPHIAAVTLAAFECMSVNFPQPPYPDQIICPEETEPTMSIWTIISKVRLEAFMW
GAGTAIGELPPYFMARAATLSGIDPDDEDYEEAAEMFEDHPDGDNSISTRAKLAMKKLVQ
RVGFFGILLCASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAVIKMHIQQIFVVMTFS
KHHVEMLVDWIGYLPVIGTSMQLPFKDFLKKQKENLHHKPGTHIATSESWLQWFFEKLII
AMVLYFVVSIVNSMAQSYMGKKQKEAREKKTSK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggggaataataagttaaatggttcatcacgtttagcgcacgacactgtaatgcaagag
ttgaagcaaaaagatcgagaagaaagaagtaaacttgttatttggaagcagccgattact
acactgcagtattttactttagaatgcatttcaaagttacacaaagcatcaataaaattg
agagaaaagaaactcactgttgcagtttttaccattttatcaatacttacatatttgttg
tgtgtgacgcaaggaccgcattctgagtatttcagttcatggagcaaagttatagcatgg
tgtggatactgggttggactcggtatcttgtcttctgtggggttaggaacaggtcttcac
actttcctactttacctgggacctcatatagctgcagtgacactggctgcgttcgaatgc
atgtccgtcaacttccctcaacccccctacccagaccagattatatgtcctgaagaaact
gaacccactatgagtatatggaccattatcagtaaagttcggttagaagcttttatgtgg
ggtgctggcacagctataggcgaacttcccccttacttcatggcacgagctgccacgttg
tccgggattgatcccgatgatgaagattatgaggaagctgctgagatgttcgaggatcat
ccggatggtgataactcgatctccacgagagcaaaactagcgatgaagaagttggttcaa
agagtcggatttttcgggatcctactttgtgcttcaatcccaaaccctttgtttgactta
gctggtataacatgcggtcatttcctcgtcccgttttggacgtttttcggcgccacattg
atcggcaaagctgtgatcaaaatgcacatacagcagatattcgtggtcatgacattcagc
aagcaccatgttgaaatgctcgtcgattggatcggatacttaccggtgattggcacttct
atgcaactgccctttaaagattttcttaaaaagcaaaaggaaaaccttcatcataaacct
ggtacacacatagccacgtcggaaagctggctgcagtggttcttcgagaaattaatcatc
gcaatggttctttatttcgtggtttctatcgtcaattcaatggcacagtcttatatgggt
aagaagcagaaggaagcaagggaaaaaaagacttcaaaataa
DBGET
integrated database retrieval system
