Ciona intestinalis (yellow sea squirt): 100180816 Help Entry 100180816         CDS       T01056                                  Name (RefSeq) plectin   KO K10388   plectin Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cin00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100180816  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:cin04812]     100180816 Cytoskeleton proteins [BR:cin04812]  Eukaryotic cytoskeleton proteins   Intermediate filaments    Intermediate filament-binding proteins     100180816 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CH Spectrin SR_plectin_7 Spectrin_4 SH3_10 DUF2937 Motif Other DBs NCBI-GeneID:  100180816 NCBI-ProteinID:  XP_026690913 Ensembl:  ENSCING00000010149 LinkDB All DBs Position 7:complement(3430163..3473228) Genome browser AA seq 2374 aa AA seqDB search MAAPHACIWFGSVCVVYSHLIALLVILILLLLACRTCRKRRIGKTLETEQPKWDKRVVVQ SWAMNYMEMNLTAEYTIIERRKVLLDMINSTKFKKYFEEEIGKTTPGTLEAPKRVKRRKK ARRGKVSAEDASSGRLSAFYLSSLKQAVAEGTSQLEVDGAFEMNPPENADQEKDKKVIDA AERAVLRVADERDQVQRKTFTKWVNKYLSKQNRRVENLYEDFRDGHNLIALLEALSGTSL PREGNYMSHMRLPREKGRMRFHRLQNVQIALDFLKGRKLRLVNIRNDDITDGNPKLTLGL VWNIILHFQIEDITVEGTEDLSAKQALLIWAQRNMEGYDGINVTNFSSSWRDGKAFNAIL HRNNPELIDMNKVMANDNKTNLDQAFAKAENKFGVTRLLDTEDVDVDRPDERSVITYVSS LYDKFPQVPPLPTSVTKEEWQYAWEEYRLLTTSLFEWIQTQTCILCRRDDIKSAESPAQV KALIVELKRFETEDVPLKEADLRSLVSMYVDVQELSSKSRGKYMPVSGFEPKKVVNAWEG MVHEMSERDNHLTITFNRLNALHEVTLKIAKGADECNDKLNQANAGIQRIMNGEDDAKLH SDVKALLDSCDGDIRTLFVDVQSLKNSDYYQAEDMYKTVFALHEKWIALKSEYNMALQHI EQIRLDALANMKPKLEDTNEYRFLVQCIKWVEEKQATVDNFAWGTDFPTVKQQIEDFAKL QKEIKNFEKSVHTCQHENKNKFENGSSDFVTYCQLLSTLEVNYQLLCNSANTRSAHLDSL IGFVRDATTHLMWMNQKEDDETVKSIPDYDAPTLEQEYLNLMGDIEAREPSYTSTLKKGQ QLVDEQHPANNVVSAYLTALKDQWQRVLHLMLCHEQHVKDLTQHDQFCHNCAIAERKLED CKKDIQDLNETIEDGIKLSDVQEISNKLNKLQDEVADLKKSVDVIKTQSNVVPCVEERRV DAPCEKNVHIQALVTYRGDNIAVAKGEDCILLHKEDDPAQNWTVQTASGQTGSVPSLVFR IPPPSSSNIRRADSLDEDLEKLSEDQKVCENRWKFYKVVVGNKENCQNVLSWNIDTYRTL TPTERENALHQLADDLNLMKDVSKDIPDNTTPHIQKSSMDVNLCRQHVEDLEKKLQEEND LEETCQSYISRLNVLLRRISDVHDTVMTRVSKDLPQDKDEVQVLLQEQEASANELSRLEP HYSQTCDDSRKILESNPKTPMTQQLSTQLDVVVDKWNNTWNITYVYLDKIKVVHLILVNL DEAGNVVTDVEQTLLVHDVDLSDRDQLLQQQEVFLSRCDINTNLRDQMNQKSTLFVRLED HRNKMQDVEVKLSEAVNAPPTSKDVEECSERADDLLQRWKVCKVKVDDRLNKITAVLPQA EKALAEEKTSQSLIARLRKLLEKIQSIEEKEKPLTNNPLPHDKDALADVQNTQQGLVDKV EDLKTDYDCLQAEVVNFVNHEATGAAPSLPELREALHDVQECWTRVWLITHIFLEKIRGV THTIQALKVCEGAVENFETAIADDCDTDDLAAVQLRNQRIKNLLGACDNVDNSFGTLRKN HSSTRGVVSQFPPEMMQGPEVEDLDTEITALEERWAAAKAKLMILAANTEKQCLKLQKAS SMDREASDLLHRVLALNAELSRIEQSQTTLIQMPLSHDDKNSIERCMLQQNHIGEKLHLL SGDYFTLSAECTNSHQANGTDDVSFLNTTLEKLDDAERIMHQLWEELNKVSQLYATKLAV LKEAVVKIHDFEDTTSNYEQCIEKPVDSGDVNELKKLRAQIMQLAAEVPKQDETAQATKS KVGEVENAGEQLMAASPTALDAHIEPDVDAEQCKSKYVSVDERWEAVKSKLADRLEQVDA AITDNLAVAETERTNMTLLSEIESLCSEIGKVENAQLVRADVMLPNDVTAVNRVINQQKV MSDKLENELQPKYEDLCERSSQQLATTPDSPTKDKLQHATSNMNDSWENVRQMVSLYMQK LYAINALLEALAIARPVVKDYEVKILKAQSALERDGQGMCDPVKIRDACAILQELKEQAN EDQKKIDDLQSALDDSLASVPNPEEDQDISANAPVAQKVLDDWNRIQQQLHLVLNQLNEE LPHAEKLAGVEKSVQELLPALHNIGNELDGIKHTIQARICVSMPAETDSMEKAIAQQKVT ANRLKEIKDNLETLKQRSEPIMQVDTTSVKHLKDDFNKLDDQWTSVNDLSDQYLEKLSCM QEAVGTINVTRGIVTSYETQLLIHDTMASTEEGLQKQREILQKLDSEVPTNDPKFVTMAD SCECVKQQVDKMNETTPGVDSDEYPDVARKLIDRWNLSKYQVKERLAYALVGEAKLQELQ KEAELHKEWLNAKEERVYSDENWIPKCRQTTRNS NT seq 7125 nt NT seq  +upstreamnt  +downstreamnt atggctgccccacacgcatgcatttggtttgggagtgtgtgtgttgtctactctcacctc atagcactactagtcatcctgattttgttgcttcttgcatgcagaacctgtaggaagaga cgcattggaaagacactggaaacggaacaaccgaaatgggataaacgtgttgttgttcag agctgggcaatgaactatatggaaatgaatcttaccgcagaatataccatcatagaacga cgtaaagtgcttctggatatgatcaattctacaaaatttaagaaatacttcgaagaagag atcggaaagacgactcctggcacccttgaggcaccaaaacgagttaagcgaagaaaaaaa gctcgccggggcaaagtctctgcggaagatgcaagcagtggcagactcagtgcattctat ctatcctcactgaaacaggctgttgcggaaggaaccagccaactcgaagtggacggagct tttgaaatgaacccacctgagaatgcagaccaggaaaaagataaaaaagtcatcgacgct gctgaaagagcggttctcagggtagcagacgagcgcgaccaagttcagcgcaaaactttc acgaaatgggtgaacaagtatttatccaagcaaaacagacgcgttgagaatctttatgaa gattttcgagatggccataatctcattgcgttactcgaggcactgtcgggcacttcactg cctcgagaaggaaactacatgtcacacatgagattgccaagagaaaaaggtcgtatgcga tttcaccgcttacaaaacgttcaaattgctttggatttccttaaagggcgaaagctacgt ctggtaaacataagaaatgacgacatcacagacggcaaccccaaactcaccctcggtctt gtttggaacatcattctgcactttcagattgaagacatcactgttgagggcacagaagac ctatctgccaagcaagcactccttatatgggcacagaggaacatggaaggttacgatgga atcaatgtcacaaatttttcatcctcctggagagatggaaaagcatttaatgcaattttg cacagaaacaatcctgaactcattgacatgaacaaagtgatggcaaacgacaacaaaaca aacttagatcaagcgtttgcaaaagctgaaaataaatttggcgtcacccgattactagat actgaagatgtggatgttgatcgtcctgatgaaagatccgtcattacatacgtttcatca ctttatgataaatttccacaagttccccctcttcctacctctgtcactaaagaagaatgg cagtacgcttgggaggaatatcggctccttacaacttctctatttgagtggatccaaaca cagacgtgcattctttgtagaagagatgacatcaagtctgctgaatcacctgctcaagtt aaagcacttattgtggaacttaagagatttgaaacagaggatgtgccattgaaagaggct gacttaaggtcacttgtatcaatgtacgttgatgtacaagaactcagcagcaaatcacgt ggcaagtatatgccagtgtctgggtttgaacccaagaaagttgtaaatgcatgggagggg atggtgcatgaaatgagtgaaagggacaaccaccttactattacattcaacaggttgaat gcacttcatgaagtcacgcttaaaatagccaagggtgccgatgaatgtaatgataaactt aaccaagctaatgcaggaatacaaaggataatgaatggcgaagacgatgcgaaactccac agtgatgtcaaggctttacttgattcctgtgatggggatattcgtacattgtttgttgat gtacaatctctcaaaaacagcgattactaccaagctgaagatatgtataaaaccgttttc gctttacatgaaaaatggattgcgttaaagtctgaatacaacatggcgcttcaacacatt gagcagataaggcttgatgcacttgctaacatgaaacccaaactagaggatacaaacgaa tacagattccttgtccagtgcataaaatgggtggaagaaaaacaggcaacagttgacaac tttgcttggggaactgactttccaacggttaagcaacagattgaagattttgcgaaacta cagaaagaaattaagaactttgaaaaaagcgtgcacacttgccaacacgagaacaaaaac aagttcgaaaatggatccagtgattttgtcacttactgtcagcttctctccactttggaa gtaaactaccaactcttatgtaattcggccaacacgagatctgctcaccttgacagtttg attggttttgttcgagatgcaacaactcatttaatgtggatgaaccagaaggaagatgat gaaactgtgaagagcattccagattatgacgctcctactcttgagcaggaatacctgaac ctaatgggagacatagaagcacgcgagccttcatacacctcaacacttaagaaaggacag cagcttgtagatgaacaacacccagctaacaatgtagtcagtgcatacctcactgcactt aaggatcaatggcagcgagttcttcacttaatgctctgccatgagcagcatgtgaaagac ctcacacaacatgaccagttctgccacaactgtgccattgccgaacgcaaacttgaggat tgtaagaaagatattcaagatttgaacgaaacaattgaagatggaatcaaattatcagat gttcaagaaatttcaaataaacttaataaactgcaagatgaagtagctgacttgaaaaaa tcagttgacgtgatcaaaacacagagcaacgttgttccttgtgttgaggagaggcgagtg gatgctccatgtgaaaagaatgttcatattcaagcacttgttacttacaggggagataat atcgctgtcgcaaaaggagaagactgcatcctcctccacaaggaagatgatccggctcaa aactggaccgtgcagaccgcatccggtcaaactgggagcgttccctccctcgtcttccga attcctcctcccagctcctccaacatccgaagagcggattctttggatgaggatttggaa aaattgtccgaggatcaaaaagtttgcgaaaatcgatggaagttttataaagttgtcgta gggaacaaagaaaactgccagaatgttttgtcctggaatatcgacacttaccggaccctg actccaacggagcgtgaaaacgctcttcatcagctcgcggacgaccttaatctgatgaaa gatgtttccaaagacatccctgataacaccactccccatatacagaaatcatccatggat gtaaacctatgcaggcaacatgtggaagatttggagaagaaattgcaagaagagaatgat cttgaagagacatgtcaatcctacatctcaagacttaatgttttgctccggaggatttcg gatgtccatgatacagtgatgaccagagtgagcaaagatctccctcaagataaagatgag gttcaagttttactccaggagcaagaggcatctgcaaatgagctttcacgtctagaacct cattactcccaaacatgtgacgactcacgaaaaatactcgaaagcaatccaaaaactcct atgacacaacaactttcaacacaacttgatgtagttgtggacaaatggaacaacacttgg aacatcacttatgtttaccttgataagatcaaagttgttcatctgatcctcgtaaacctg gatgaagcgggtaacgtcgtcaccgatgtggagcaaactctcttagttcatgatgtagat ctctcggatcgtgatcagctcctccagcagcaagaagtcttcctgagtcgatgtgacata aatacaaacctcagggatcagatgaaccagaagagcacgctctttgtgaggttggaggat cacaggaacaagatgcaggatgtggaagtaaagttgagcgaggcagtaaacgctcctcca acatccaaagatgtagaagaatgctccgagagagcagatgaccttttacaaagatggaaa gtctgcaaagttaaagtggatgacagattaaacaagatcacagctgttcttccccaagca gaaaaagcgcttgctgaagaaaaaaccagccaatctcttatcgcaaggctgcgaaaactt ctggagaaaattcaatcgattgaagaaaaagagaaacctcttactaacaatccacttcca catgataaagatgctttggctgatgtacaaaacacacaacagggtttggtcgataaagtt gaagatttgaaaaccgattacgattgcttgcaagcagaagttgtaaactttgtcaatcac gaagctacaggcgcggcaccgagcttgccagagcttcgcgaggctttacatgacgtacaa gaatgctggacacgtgtgtggctgatcacacatatcttcctggaaaaaattcgtggtgtg acgcacaccatacaagcactgaaagtatgtgaaggggcggtggaaaactttgaaacagca attgctgatgattgcgacacagatgacttggcagcggtccagttaagaaaccagagaata aagaatcttctcggagcatgtgacaatgtggacaacagtttcggaacgctccggaagaac cactcctccaccagaggagttgtctcccaatttcctccagagatgatgcaaggtccggag gtagaggacctggacacagagatcacagctctggaagaaagatgggcagcagccaaagca aaactgatgattctagcagcaaatacggagaaacaatgtcttaaactgcaaaaagcttca tccatggatagagaagcaagtgacttactgcacagagtcctcgcattaaatgctgagctc agcagaattgagcaatcccagacaacccttatacagatgccattatctcatgatgataaa aacagtatcgagagatgcatgttacaacaaaaccacattggcgaaaagctgcatctactt tccggagattatttcacactttctgccgaatgcacaaacagccatcaagcaaatggcaca gatgacgttagcttcctaaacaccacccttgaaaaacttgacgatgccgaacgcataatg caccaactgtgggaggaattgaacaaggtttctcaactctatgcaacaaaacttgctgtc ttgaaagaagcagttgtgaaaatccatgactttgaagatacaacatcaaactatgaacaa tgtattgaaaaaccggttgattctggtgacgtcaatgaactaaagaaacttagagcacaa atcatgcaacttgctgcagaagttcccaagcaggacgaaaccgcccaagccaccaagtct aaagttggtgaagttgaaaatgcaggggaacagctcatggcagcgagcccaacggcgctc gacgcgcacatagagcccgacgtggacgctgaacaatgcaagagcaaatatgtgtcggta gacgagcgctgggaggcggtgaagtcaaaattggcggatcgacttgaacaagttgatgct gctattacggataaccttgcagttgcggaaacagagcgtacaaacatgacacttctatct gaaattgaatctctatgttctgagattggtaaagtcgaaaacgctcagcttgttcgagca gacgttatgctgcctaacgatgtgactgctgttaacagagtcattaaccaacaaaaggtt atgtcagacaagcttgaaaatgaactgcaaccaaaatacgaggacttatgtgaacgcagt agtcagcaacttgctacaactcctgattcgccgacaaaggacaaactacaacacgctacg tcaaatatgaacgacagttgggaaaacgtccggcaaatggtatcactgtatatgcaaaaa ctctatgccataaatgcacttctggaagctttagctattgccagacctgtagtaaaggat tacgaagttaaaatactcaaagcacaaagtgcattggaacgagatggacagggaatgtgt gacccagttaaaataagagatgcatgcgctatactgcaggagttaaaggagcaagccaat gaagaccaaaagaagatcgatgatcttcaatctgctctggatgactctcttgcatccgtt cctaatcccgaggaggaccaggacatctctgccaatgctcccgtcgcacaaaaagtcctc gatgattggaaccgcatccagcaacagctccacctggtgctcaatcagctgaatgaggag ttaccacacgccgaaaaattggctggagtagagaagagcgtacaagaattgctcccagca ttacataacattggtaatgaattagatggtatcaaacatacaatacaagcgcgtatatgt gtttcaatgcctgctgaaactgacagtatggaaaaggcaattgctcaacaaaaggttact gctaatcgcttgaaagagataaaagacaatctggaaactctgaaacagcgtagtgagccc atcatgcaagtggatacgacatctgttaaacatcttaaagacgattttaacaaactggat gaccaatggacctcagttaatgacttgagtgaccaataccttgaaaaattgtcatgcatg caagaagcagttggcaccataaacgtgacgaggggaatcgtaacttcatatgaaacacaa ctccttatacatgatactatggctagcactgaggaaggcttacaaaaacaaagagaaatt ctgcagaaattggattccgaagtgccgacaaacgacccgaaattcgtgacaatggccgac agttgtgaatgtgtgaagcaacaagttgataaaatgaatgaaacaacaccaggtgttgat agtgatgaatatcctgatgtagcgagaaaattgattgacaggtggaatctgtcaaaatat caagtcaaggagagattagcatatgcgttggttggagaagcgaaactacaagaactacag aaagaagcggaactccataaggagtggttgaatgctaaggaagaaagggtctactcagat gaaaattggattccgaagtgccgacaaacgacccgaaattcgtga

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