Ciona intestinalis (yellow sea squirt): 100180918
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Entry
100180918 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100180918
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100180918
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100180918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
BRE1
zf-RING_5
zf-rbx1
ZapB
zf-RING_UBOX
Pox_A_type_inc
DUF5703
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
100180918
NCBI-ProteinID:
XP_002119359
Ensembl:
ENSCING00000024382
LinkDB
All DBs
Position
11:complement(1636758..1646144)
Genome browser
AA seq
941 aa
AA seq
DB search
MASKRQLDAGPTSDSDEPQAKRPTTILPAVSIGPVASLEEMDLKMLKFQNKKLWEKIEIR
RQAERELEDQIETMEAKQTATDATLSLVNRYWDQLDENIKITLKRLGQDSDEVVEENSTQ
DEEDLKKKSFHRLLCDNDFQVIKENVADRLDFSRRTFAKVIDAILDQKKQQTSISEAIKE
NENVEEHLKTEVGKLEEANNNLQELTTGLQAEHHKFYMDRSNVEEKINLLEERVEELQET
AETARWELKKTRLREDRLTRHLAEALDKINKGTLVEASTSNAAAAETETAAKAPNEQAEE
AVLLAESRLNELETLKKQHQDCLKELERAKIDLRNIPDSLIIQSSEYRTLKSQFSVLYHE
SVQMKTMLDESRVLIQQTRNSNLRRIEQMEVDELQTQTKLRNELIQLEDTLAKVRHDYES
LHTELEQNLAANEQAGPVNREMRHLINSLQNHNRQLKGEIQRYKRKIKDLQNELAKSKQE
EIRRLQDEIKHESDKLFSSVKSVKLEEDVDVKKEVVEEEEEATSNQPGFKSNPQLYQEIE
DLEKKLNDKGTEMEKISKELKTTNAEMKELKLLLDMYKGLSKEQRDKAEIMANEKVATSA
RDDLEKKIRSLEEDVAREDSRSKELEKKLQRSEEQLADAVGKVKEEKDRREKKEEELLLR
GPDADSLRKMKVLEETIIELRRNLSATKQEEEALLSEMDVTGQAFEDMQEQNMRLLQQLR
EKDDANFKLMSERIKANQVHKLLQEEKSVLQDQNNTLHMQVDSQNQVVRMLEEKERSLQG
TLVTMEKELNLRSQIMDLHKRKAVEMTQIREDLLRDVEKKKERLSILEESMDRKVENLEE
EHFKLSRLQEDGAKLRRKLEKHKKTEGLYSADEVLMEEIKEYKTKLRCPCCNVNNKDAVL
TKCFHVFCIKCIKTRYETRQRKCPKCNAGFGGNDFHRIYIE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaagcgacagttggacgcaggaccaacatctgacagcgatgaaccgcaagca
aaaagaccaacgacgattttgcctgcagtcagcattggaccagttgcttcactggaagag
atggatctgaagatgttaaagttccagaacaagaagttgtgggagaagattgagatcaga
agacaagcggaacgcgagttggaagatcagattgaaaccatggaagcaaaacaaacagca
actgatgctacactaagtctcgttaatagatactgggatcagttggatgaaaacataaag
atcacattaaaaagactcggacaggactccgatgaagtagttgaagaaaactcaactcaa
gatgaggaagatttaaaaaagaaatcattccaccggctactctgtgacaacgactttcaa
gtaatcaaagaaaacgtggcggacaggttggatttctcgcgaagaacatttgcaaaagta
atcgatgctatattggaccaaaagaagcaacaaacatctatttctgaagcaatcaaagaa
aatgaaaatgttgaggaacatctgaagacagaggttggaaaactggaagaagcgaataat
aatctacaggaactaactacagggttgcaagcagaacaccataagttctacatggatcga
tcgaacgtggaagagaagatcaatttattggaggagagagtggaggaactacaggagacg
gcggagaccgctcgctgggagctgaaaaagacgaggcttagagaagacagacttacccga
cacttggctgaagcattagacaaaataaacaaaggaactttagtggaagcttcaacttct
aatgctgctgctgctgaaacagagactgctgctaaggcgcccaacgaacaagcagaagaa
gcggttcttctcgcagaaagtcgattgaatgaattggaaacattgaagaagcaacatcag
gattgtttaaaggagttggaacgagcgaaaattgatttacgcaatatccctgattctctc
atcatccagtcatccgaatatcgaacccttaagtcccagttctcggtgttataccatgaa
agtgttcagatgaaaacaatgttggatgaatcgcgggtcctcattcaacagacaaggaat
tcaaacttgaggagaattgaacaaatggaggttgatgaacttcaaacacaaactaaactt
cgtaacgaactcatccagttagaagacacgcttgccaaggtgagacacgattacgagtct
ctacacaccgaacttgaacaaaacctcgcagccaatgagcaagcggggccagtgaaccgt
gaaatgcgtcatctgatcaatagtctacaaaatcacaacagacagttgaagggagagatc
caacgatacaaacgtaaaattaaagatctacaaaatgaacttgcaaaatctaaacaagaa
gagatccggaggttgcaagatgagatcaaacatgagtcggataaactcttttcatcagtg
aagtcggtcaagctggaggaagatgttgacgtgaagaaagaagttgtggaagaggaagaa
gaagcaacaagcaaccaacctgggtttaaatcaaatccccaactttaccaagaaattgaa
gatcttgaaaagaaattgaatgacaagggaacggagatggaaaaaatatcaaaagaactc
aaaacaacaaatgctgaaatgaaagaattgaaattattacttgacatgtacaagggattg
tctaaagaacaaagggacaaggcagaaataatggcgaatgaaaaagttgcaacatctgcc
agagatgatcttgagaagaagatccgatcgttggaggaagatgttgctcgtgaggattcg
aggagcaaagagttggagaagaagctacagagatcggaggagcaacttgcggatgcggta
gggaaggtgaaggaagagaaagataggagagagaagaaagaagaggagcttctacttagg
ggtccggatgctgattcattgagaaagatgaaggtattggaagaaacgataatcgagctt
cggcgcaatctctcggccaccaagcaagaggaggaagctcttctatcggagatggatgtc
acgggacaagcgttcgaggatatgcaggaacaaaacatgaggttgctgcaacagctacgt
gagaaagatgacgcaaactttaaacttatgtctgagagaataaaagccaaccaagttcac
aaacttctacaagaagaaaaaagtgttttacaggatcagaacaacacgttgcatatgcag
gttgactcccagaaccaagtagtccggatgttggaggaaaaagagcgatccttacaagga
accctcgtcactatggagaaggaacttaacttgaggtcgcagatcatggatttgcataag
agaaaagcagtagagatgacacagattcgcgaggatttgctccgagatgttgagaagaag
aaagagaggttgtctatcctggaggaatccatggatagaaaagttgaaaatctcgaggaa
gaacatttcaaactaagtcgattacaggaggatggggcaaaactccgtcgtaagttggag
aaacataagaagacagaaggattgtatagtgctgacgaagtgcttatggaggaaatcaag
gaatataagacaaagctgagatgtccatgttgtaatgtgaacaacaaggacgccgtgtta
accaaatgttttcatgtgttttgcatcaaatgcatcaagacaagatacgaaacacgacag
agaaaatgcccaaaatgcaacgcagggtttggtggaaatgatttccatcgtatttatatc
gagtag
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integrated database retrieval system
