Ciona intestinalis (yellow sea squirt): 100180920
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Entry
100180920 CDS
T01056
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03440
Homologous recombination
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100180920
03460 Fanconi anemia pathway
100180920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100180920
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100180920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
HHH_8
EME1-MUS81_C
HTH_45
Motif
Other DBs
NCBI-GeneID:
100180920
NCBI-ProteinID:
XP_002125898
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MQKFGKKRKVDSCPNRLFLSYLKEWKDDASEKELKSYHTYNKAYKSLEKYGLPLQSGKEA
VILANFGEKICAMLDTRLGKDSKEKGVTPREFLEQSRQVSESWWKSLETEPNKKKQKTLK
VNSNVNRKQRTYVPVKNSGAYALLIALSRNKASENSFGYMKKAELQREAQTFCTKSFTVP
DPGSQYTAWSSMATLINKELVKKHNNPAKYEITDSGLELAQKLDIENQNKGITNTGLEFV
QKLDTESQNSNQNTIENLWKKTKQKENLVNFSDSDSECEMINLVDRVKSKQKPLKKVNKN
TENYAVLKPKAQLVQFSDSDPDIEVIEQPSKCVDLTLSSDEEISQGKNTYNTPEIKSTVP
NSNPQCSLAHSSGGNVEFCLEPGDFDVVLCVDTREVSGDKRKKEMQREIQKLNVETIDRV
LQIGDFVWVAKEKSYTGNGREIVLDYIVERKCMADLAMSIRDGRFHEQKIRLKQCGAKKI
VYLVEDMNKIQHQSLPEKTLRQALINTQFVDDIFVKYSENIAATAQYLGILTTKLKKMYR
NKTLLACEIAEVQKTCNDENSVQKLLSFDDFNDGSLKGKGLTITEMFVRQLMQLHGMSYD
KADTITQLYPTPYLLVQAYKNCESLKQKQDLLAKIKTGLLKRNLGANLSKVVYHVFHS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatttggcaaaaaaagaaaagttgattcttgtccaaaccgtctttttctctcc
tatttaaaagaatggaaagatgacgcttcagaaaaggaattaaaatcataccatacttac
aacaaagcatacaagtctttagaaaagtatgggctacctttacagtctggtaaagaagcg
gttattttggctaactttggcgaaaaaatctgcgctatgctggacactagacttggaaag
gattccaaagaaaaaggcgtcacgcccagagaatttttagaacagtctcgacaggtttct
gaaagctggtggaaaagtttggaaacggaacctaataaaaagaagcaaaaaaccctaaaa
gttaactctaatgtgaatcgtaaacagcgaacttatgtccctgtaaaaaattccggtgcc
tatgctctattaattgcactgtctagaaataaagcttcggaaaatagttttgggtatatg
aaaaaagcagagttgcaaagagaagcgcaaactttttgtacgaaatcttttacagtgcct
gaccctggaagtcagtatacagcatggagtagtatggcaacgttaattaataaagaactg
gtaaagaaacacaacaatccagctaaatatgaaataacagactctgggttggagctggcg
caaaaattggacatcgaaaatcaaaacaaaggaataacgaacactggtctagagttcgtg
caaaaattggacaccgaatcgcaaaatagtaatcaaaatactatagaaaacttgtggaaa
aagacgaaacaaaaagaaaatttagtcaatttttctgactccgattctgaatgcgaaatg
atcaatttagtagatagagtgaaatcaaagcaaaaaccgttgaaaaaagttaataaaaac
actgaaaactatgcagttttgaaacctaaagcccaattggttcaattttctgattctgac
ccagatattgaagtgattgaacagccatctaaatgtgtagaccttactttaagcagtgac
gaagaaatatcgcaaggtaaaaatacatataatactccagaaattaaaagtactgttcct
aatagcaacccgcaatgctctctagctcactctagtggcggaaacgttgagttttgttta
gagcccggagattttgacgtagttttgtgtgtggatacgagagaagtctcaggagataaa
agaaaaaaggaaatgcaaagagagattcaaaaacttaatgtggaaactattgaccgcgtt
ttacaaattggggactttgtatgggtagctaaggaaaaatcctatactggaaatggtaga
gaaattgtactagattatatcgttgagagaaaatgcatggcagatttagcaatgtcaatt
cgagatggtcgttttcatgagcaaaaaatccggcttaaacagtgcggggccaaaaaaatt
gtgtatttagttgaggatatgaataaaatacagcatcaaagtttgccggaaaaaacgcta
cgtcaagcgcttataaatacacaatttgtcgatgatatttttgtgaaatatagcgaaaat
attgcggctacagcgcagtatttgggaattctgaccacgaaattgaagaaaatgtacagg
aataaaactctgctagcttgcgaaattgctgaagtacaaaaaacttgcaatgacgaaaac
agtgtccaaaaactgctgagtttcgacgattttaacgacggtagtttaaaaggaaaaggg
cttactattacagaaatgtttgtaagacaattaatgcagttacatggtatgtcttatgac
aaagctgataccataacacagttataccctactccctatctgcttgtacaagcctataaa
aactgtgaaagtttgaagcagaaacaagatttattagcgaaaattaaaactggactttta
aaacgaaatttgggcgctaatttaagcaaagttgtttatcacgtttttcactcttaa
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