Ciona intestinalis (yellow sea squirt): 100180937
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Entry
100180937 CDS
T01056
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100180937
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
100180937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
AAA_34
AAA_14
Motif
Other DBs
NCBI-GeneID:
100180937
NCBI-ProteinID:
XP_018673463
LinkDB
All DBs
Position
3:2176500..2188787
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AA seq
1159 aa
AA seq
DB search
MACADGNVLQSRENLYQDVQTEVKKLIAEAKTYAAEGELYKSIKIFKKAYKIAPTEKILS
RIRRVEEAIAAEKSDSDEEDENLGLVELDNGMVIYKKLVERLYPHQIEGIKWMYDLFQNK
RKGGILADDMGLGKTIQVIALISALFDAKLIKHVLLVLPLSLIPNWTNEFANWAPGIKVE
EYHGPVAKRKAILQQCMHRRSVCITTYGLIVTKWETLGETLDGREFVWDYIILDEGHRIK
NASKTTKGLHKIPSRNRIILTGTPVQNKVRDMWALMDWVTQGSLLGTQKTFKSSYEIPIE
CARQKGATSGQIRLGNMMSESLRKLTDPFILRRTKDGLTRNEKENRGNLACVDGAQDPTV
LNKQPRFPKLSTKNDFVVWVYLSDIQQQIYSDFIQLDSVKELLLTHRSPLVHLTVLKKIC
DHPRLLSTKACIELGLESNDSMTENLDQEAIEGCAANRINNISDQVLMEESGKLQFLIPL
LLRLREEGHRTLIFSMSRKMLNIIQRILMNLKFKVMRMDGLVTKLSEREKRVKLFQEDSS
YSVFLLTTQVGGVGLTLTAADRVVIYDPSWNPATDSQAVDRIYRIGQKKSVAVYRLITCG
SVEEKIYRRQIFKNSVIQQSTGQCDDPYRYFSKQELAELFQLDDVLSSSTQIQLSQLHSH
QRKLDDHLQEHMDYLHELKMFGVSDHDLMFSQKPDDIDCDDEAVTGLTNQVELAQNRLLM
ESNQFTGITDAEQRWGGFVSEDRVADVKPKDLEPVYPIEGLTTKLETLQIPSPPKKEDIK
PIKIEPNLEEEIVCLDYPLPSLLKKKVGPTNPLSYEDGEDIILCGDSPMQMDPKQNVTSG
NPSTPIVVEDSFDMFVQSNNNDSDTDELSSDDEWKKAFSETTGNVVELQPAENLSKVSSA
LSSTMMDGNMARKSQLFGLDEELVNDVETTEDNVTDLIDQSAASVSFKLSVSSDDSALEY
NSPQRTNTALNDNNLSTDVSTSLHDVTPPEEIAQGEVSSNKNESMSSGTSLIDVNASFED
VAKLIHNATKSIEEIPTSGNNTTTSIVDNTFSDLDDEDDDITQELSKEENNLTHDDENNL
THDDDITQESFSASGVTAEKIVKSGDNSEINLYLSDEDEQLSTCDKTESVCSVNSLDSFE
FPTFDNLEDSNGFISDADD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgcggatggaaacgtgcttcaaagcagagaaaatctatatcaagatgtgcaa
actgaggtaaaaaagttaattgctgaagcgaaaacatatgctgctgaaggtgaactttat
aagtcgattaagatctttaaaaaagcatacaagattgcaccaaccgagaaaattttaagc
agaataagaagagttgaagaggccattgctgcggaaaaaagtgattcagatgaagaggat
gaaaatttaggacttgttgaacttgataatgggatggtgatttataagaaactggttgaa
agactttacccacaccagattgaagggatcaagtggatgtatgacctgtttcaaaacaaa
agaaagggtggaatactggctgatgacatgggccttggaaaaaccattcaagtgattgcc
ttgatatctgcgttgtttgatgcaaagttaatcaaacatgtccttcttgttctgccttta
tctcttattcctaactggacaaatgagtttgcaaactgggcacctgggattaaagttgag
gaataccatggtcctgttgctaaacggaaagcaattctgcaacagtgtatgcatagacgc
agtgtgtgtatcacaacttatggtttgatagtaacaaagtgggagacacttggtgaaaca
ttggatggaagggaatttgtgtgggattacatcattctggacgaaggccatcggatcaaa
aatgcctcaaaaaccacaaagggtttacacaagataccatctagaaatcgaattattttg
acaggaacacctgtgcaaaataaagtgagggatatgtgggcattaatggattgggtaact
cagggttctttactcggaacccaaaaaactttcaaatcttcgtacgaaatccctattgaa
tgtgcaagacagaagggtgcaacctctggtcagatacggttaggaaacatgatgtcagaa
agtttacgcaagttaactgatccgttcattttaagaagaaccaaggacgggcttacacgg
aatgaaaaagagaatcgtggcaatcttgcatgtgtagatggtgcacaggatcctactgtt
cttaacaaacaaccaagatttccaaaactttcaactaaaaatgactttgttgtgtgggta
tatttgtcggacatacagcaacagatatatagtgacttcatacaacttgattcagtgaag
gaacttcttttaactcatcgttctccccttgtacatctcactgtacttaagaagatatgc
gaccatccacgacttctctcaaccaaagcttgtattgaacttggtttggagtcgaatgat
tcaatgacggaaaatttggatcaagaagcgattgaaggatgtgcggcgaaccgtatcaat
aatatttctgatcaagttcttatggaagaatccggaaaactgcagtttcttatacctctg
ttgctacggttacgagaggaaggacatcggactctcatcttctccatgtcgaggaagatg
ctcaacatcatccagaggatcttaatgaatctcaagttcaaggtgatgagaatggatggt
cttgttacaaaactcagtgaaagagagaaaagagtaaaattatttcaggaagactcgtca
tatagtgtttttcttttaacaactcaggttggtggtgtaggacttacattaacagcagct
gatcgtgttgtaatatatgatccctcatggaacccggccactgattcacaagctgtcgac
agaatctacagaattggacagaaaaagagcgtggcagtgtatcgactcatcacatgcggt
tctgtggaggaaaaaatctaccgtcgtcaaattttcaaaaactcagtcattcaacaaagt
acaggtcaatgtgatgatccttacaggtacttttccaaacaagaattagcagagttgttt
caattggatgacgttctcagctcgtcaactcagatccaattatctcaactccacagtcac
caacgtaaacttgatgatcatctgcaggaacatatggactacctgcatgaacttaaaatg
tttggggtaagcgaccacgatcttatgttttcgcaaaaacctgatgatattgattgtgac
gatgaagctgtcactggactaactaatcaggttgagttggcacagaacagattgcttatg
gaatcaaatcaattcaccggaataactgatgcagagcaaagatggggaggttttgtttct
gaagatcgagttgctgatgtaaaacctaaggatcttgaacctgtttatccaattgaagga
cttaccacaaaattagaaactttacaaattccttccccaccaaagaaggaagatatcaaa
ccaataaaaatagaaccgaacttagaagaagaaattgtttgtttggattaccctctaccc
tctttgttaaagaaaaaagttggccccacaaatcctttgtcttatgaagatggtgaagat
attatattatgtggggattcacctatgcagatggatcctaaacaaaatgtcacatcagga
aacccaagcactccaattgtggttgaagactcgtttgatatgtttgtgcaatctaataat
aacgacagcgatacagatgagctctctagcgacgatgaatggaagaaagcatttagtgaa
acaacaggaaatgtggttgagcttcaacctgctgaaaatctctccaaagtttcttcagcg
ttaagttcaactatgatggatgggaacatggcgaggaaatcgcaactgtttggattagat
gaagaattggtaaacgatgtggaaactactgaagataatgtaacagacttaatagatcaa
agtgctgcatctgtttcatttaaattgagtgtgtcaagtgatgacagtgctttggaatat
aacagtccacaacgaacaaatacggctctaaatgataataatctctccactgatgttagt
acatcacttcatgacgtcacgccaccggaagaaattgcgcaaggtgaagtttcaagtaat
aaaaacgagagcatgagcagcggaacttcattaattgatgtaaatgcctcatttgaagat
gtagcgaaattaattcataatgcaacaaaatctattgaagagataccaacatcagggaat
aacacaactacttcaattgtagataacacattttctgacctagatgatgaggatgatgac
ataacacaagaattatcgaaagaggaaaataacttaacacatgatgacgaaaataactta
acacatgacgatgacatcacccaggagtcattttcagccagtggtgtcacagcggagaaa
attgttaaatctggggataattcggaaattaatctatatctgtctgatgaagatgagcaa
ttatcaacctgtgacaaaacagaatctgtgtgttccgtcaattcgcttgattcttttgaa
tttccaacatttgataaccttgaagattccaacggattcatttcagatgctgatgattaa
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