Ciona intestinalis (yellow sea squirt): 100180942
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Entry
100180942 CDS
T01056
Name
(RefSeq) echinoderm microtubule-associated protein-like 2 isoform X3
KO
K18595
echinoderm microtubule-associated protein-like 1/2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100180942
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EMAP
100180942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
HELP
WD40_Gbeta
CFAP251_N
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_ACSF4
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_SPT8
Tricorn_2nd
ASA1
PKcGMP_CC
eIF2A
SlyX
Motif
Other DBs
NCBI-GeneID:
100180942
NCBI-ProteinID:
XP_018670763
Ensembl:
ENSCING00000002963
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MNGPSNHVFNMFEGGNEDRIRALEQRVELQEDEITLLKSSLSDVIRRLKDVETSSHYGGM
KKPSPLKNTFHPLPSRPHIENSPRPRARPPSPGLRKRIPSSKDDGHKMNGNSGDLRRAPS
TDQLNRDNKRSSFRSKKSSGNGKQPTFNAEDASVRMHLKGRPVVLYKPTDIETSYNINSS
SALPDNKLKLEWVYGYRGRDCRSNLYSLPTGEIVYFVAAVVVLYDPKDGYQRHYLGHNDD
VKCIAIHPDKLKIATGQVAGLELDGREFKHKTCRKPRLPQVHIWDAVSLTTLHVLDSFDR
SVACLSFSKADGGAMLGVVDESNDHVLSVWNWQKEVKITEAKSSKDQVLLCEFNPQIQGS
IVSCGKNHINFWSLEGGQLVKKQGLFERHEKPKYILCLGFTANGDVISGDSSGNVQVWTK
GRKIAQILESAHDGPVFCICAIRDGFITGGKDGGIKKWSENLQTVKQTQLPEESGSVRTI
ASNDKGQLLVGTKKNSILLGDFEADFQTIVHGHVEELWCLAVHPSKAQFLTGAYDKQLVM
WDATNHTSLWFKTFDDGIQSASFYPCDNNIIAVGMTTGRWLILDSSNLELITVHTDGNEQ
HDVIKFSPDGKFLAIGSHDNMIYIYNVSDDGRKYNKHGKLSGHSSYITHFDWSADSQNIQ
SNSGDYELLYWDVQSCRQMTSAPSMRDIEWATQSCTLGFTVLGVWPEGADGTDINSVARS
TEGKLLASGDDFGKVHLFKYPAVQPRSSSHNYSGHSSHVTSVQFMAGDDRLISTGGQDCS
TMQWKVV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccatcaaatcatgtgtttaacatgtttgaaggaggaaatgaagatagaatc
cgagcattggagcaaagagtggagctgcaggaagatgagataactcttctaaaatcttcg
ttatcggacgtgatcagaagattaaaagatgttgaaacatcatctcattatggagggatg
aagaaaccatctcccttgaagaatacatttcaccctctcccatctcgcccccacattgaa
aattcccctcgaccccgtgctagacccccatcacccggtcttcgaaaacgaatcccatcc
tccaaagatgacggtcataagatgaatggaaactctggtgatttaaggcgcgctccttct
actgatcagttaaaccgagataataaaagatcaagttttcgttcaaagaaatcaagtgga
aacggcaaacaaccaacattcaatgctgaagatgcttcagtgaggatgcatttaaaagga
cgaccagttgttttgtataaaccaactgacatagaaacatcatataacatcaactcatct
tctgcactacctgataataaattgaaactggaatgggtgtatggatatcgtggaagagat
tgtcgctcaaacctctattcgctaccaacgggtgaaattgtttattttgtcgctgcagtg
gtcgtcctgtatgatcccaaggatggatatcaacgtcattatcttggtcataatgatgat
gtgaaatgcatagccattcacccggataaactgaagatagcaacaggtcaagtggcggga
cttgagcttgatggaagggaattcaaacacaaaacttgtagaaagccccgtttaccacaa
gttcatatctgggatgcggttagtctcacaactcttcatgtacttgactcatttgatcga
tcagttgcttgcctcagcttctcaaaggctgatggtggagcaatgttaggcgtggttgat
gaatccaatgatcacgtactatctgtgtggaattggcagaaagaagtgaaaattactgaa
gccaagtcttctaaagaccaagtattgctgtgtgagttcaaccctcagatccaaggaagt
atcgtcagctgtgggaaaaaccacatcaacttctggagcttggaaggtggacaacttgtt
aagaagcaaggactttttgagagacatgaaaagccaaaatacatcttgtgtcttggattc
acagcaaatggagatgttatatctggtgattcaagtggtaatgtacaagtgtggaccaag
ggaagaaagattgcccagatattggagagtgcacatgatggtcccgtgttctgtatatgc
gcgatacgtgatggatttattactgggggcaaagatggcggcatcaaaaagtggagcgaa
aatctccaaactgtaaaacaaacacagttacctgaagaatcgggtagtgttcgtacaata
gcgagtaacgacaaaggtcagttgttggttgggacgaagaaaaattcgattctccttgga
gacttcgaggctgacttccaaactattgttcatggccatgttgaagaactttggtgtctt
gctgtccatccttcaaaagctcaattcctcacaggagcttacgacaaacaacttgttatg
tgggatgctactaaccatacttcattatggtttaaaacattcgatgatggtatccaatca
gcttccttctacccatgtgacaacaacatcatcgcggttggcatgacaacaggacgatgg
ttgatactcgactcatctaacttggagttaattaccgtacatactgatggcaacgaacaa
catgatgtcatcaaattctcacctgatggcaagttcttagccattggttcccatgacaac
atgatctacatctacaatgtaagcgatgacggaaggaaatataacaaacatgggaagtta
tccggacatagcagttatatcacgcattttgattggtcggctgattctcaaaatatccaa
tcaaattctggagattatgagcttttgtattgggatgttcaaagttgtcgacaaatgact
tcagctccttctatgcgagatattgagtgggcgacacaaagttgtacgttaggattcact
gtgttgggtgtttggcctgaaggggctgatggaacggacattaacagcgtagctcgttct
actgaaggcaaactactcgcttcaggtgacgacttcgggaaagtccatttattcaaatat
cctgcggtacaaccaaggagttccagccataattacagcggacacagcagtcacgtgaca
tcggttcaattcatggcgggcgacgatcgtttgatatctacgggtggacaagattgtagc
actatgcagtggaaagtggtgtag
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