Ciona intestinalis (yellow sea squirt): 100180953
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Entry
100180953 CDS
T01056
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 1-like
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00515
Mannose type O-glycan biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100180953
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100180953
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100180953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
100180953
NCBI-ProteinID:
XP_018668559
Ensembl:
ENSCING00000019997
LinkDB
All DBs
Position
8:complement(6193041..6195580)
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AA seq
671 aa
AA seq
DB search
MGACRSMKRVSNRNFVTICVVFMVTYFLMKRFLQEEKTTLRKYESDLQIQTGRQKPSQCE
TIHVFLVCTGYKTVKDMVVLVKSILFHRKDSLHFHYLVDNVSKPILKELFRSWDIPDLKV
SMYEDIAVLDDVSWLPFTHHSGINSVYKLAILKVLPLYIDKVIVLDSDMVFATDIAELWL
QFRHMDQQQAFGMVENQSDWYLGTLKFEYVVWPAIGRGLNSGMMLLDCEKLRRANWDSEW
KETAQQGIKRFKTVPLADQDVINLFLVNNKHMLYKLECNWNFQLPYERKMELCYNDHKHN
VKIVHWNNVRKHDINSDQIQGLTNLFTIFLEMNSMSLRHQAPGCTQRGEVKLYADDNLTK
ETEICDKFTAQASSRHRTHIYYLPFKYQNKDSRDITLVTHLQLKDMQTFETLCKTWTGPI
SVAIFVADRETDQLEHFIDSSDILKQRDNIGYHLVFNGVNEQVPPISYLLNTSASQVLTE
YLLIYDVKYQQAQQLYDILYNYFSKFDVLSLESVYVLPVFETTSNVLDSTPNTKVSIVKQ
IAVGEIKYSNDQRANSFDIVRWATATTPYLTDWRNIGTPIIFALRKQHFMQLFDGFLDSD
RARIALGIELDAVGYKFFVLPTAFAVSNSLYPSNRNLYSIDIKHCTEITQDLFFDYLKRK
YPSFNRTKYLY
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcatgccgaagtatgaaacgagtttctaatcgaaactttgttacgatatgtgtg
gtttttatggtaacatactttctaatgaaaagatttttgcaagaagaaaaaacaacgttg
agaaagtacgaaagcgacctgcaaatccaaacagggagacagaaaccgtcgcaatgtgaa
accatccatgtttttctcgtgtgcaccggatataaaactgttaaagatatggtagtactt
gttaagtcgatactcttccatagaaaagatagtttacatttccattacctcgtggacaac
gtttcaaagccgatattgaaggagctttttagaagttgggacataccagacctaaaagtt
tcaatgtatgaggatatagctgtattagacgatgtatcctggctaccttttacgcatcac
tctggaatcaacagtgtgtataagctggctattcttaaagtattaccgctgtacatagac
aaggtaatcgttcttgactcagacatggtgtttgcaacagacatagcagagttatggtta
cagtttaggcatatggatcaacaacaagcatttggaatggtggaaaaccagtccgattgg
taccttggtactttgaaatttgaatacgttgtttggccagctattgggcgtgggttgaat
agtggaatgatgttacttgactgcgaaaaacttagacgcgcaaactgggattcagaatgg
aaggaaacagcacagcagggaattaaacgtttcaagacagtgccgcttgctgaccaagat
gttatcaatttatttcttgttaataacaaacatatgctgtataaactagagtgtaactgg
aattttcagcttccatacgaacgaaaaatggaactttgctataacgaccataagcataat
gttaaaatagtccattggaacaacgtacgaaagcatgacattaattcggaccaaattcaa
gggttgacgaacttgtttacaatctttttggaaatgaatagcatgtcgttacgtcatcaa
gcacctggttgcactcagcggggtgaagtcaagctttatgcagacgataatttaaccaaa
gaaaccgagatctgcgacaagttcacagctcaagcctcatcgaggcatagaactcacatc
tactatcttcctttcaaataccaaaacaaggactcgcgtgatattactttagtaacccac
ctacagctcaaagatatgcagacattcgaaacgctttgtaaaacatggacaggacctatc
agcgtagccattttcgtagccgatcgcgaaactgaccagttggaacattttatagactcc
tcggatattttaaaacagcgagacaacatcggttatcatctggttttcaatggagtaaac
gaacaagtgccaccgatcagttatttactaaatacatctgccagccaagtgttaaccgaa
tatctgttaatttatgacgtaaaatatcagcaggcgcaacaactgtacgatattctttac
aactatttttcaaaattcgatgttttaagtttggaaagcgtttacgttttgccggtattt
gaaaccactagtaatgtattagattctacaccaaacacaaaagtctcaatcgttaaacaa
attgctgttggggaaatcaagtattccaatgaccagcgagccaattcgttcgatattgta
cgctgggctactgcgacaacgccgtatttaacagattggagaaacatcggtacaccgatc
attttcgcattacgaaagcagcattttatgcaactttttgacggttttctcgattctgat
cgagcgagaattgcactgggaattgaattagacgctgttgggtataagttcttcgtttta
ccaacagcttttgccgttagtaactcattgtaccctagtaatcgcaatttatactccatt
gatattaagcattgtacagaaatcacacaagatttgttttttgactacctcaaacgaaaa
tatccctcttttaaccgtacaaaatacctttattag
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