Ciona intestinalis (yellow sea squirt): 100181024
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Entry
100181024 CDS
T01056
Name
(RefSeq) survival motor neuron protein-like
KO
K13129
survival motor neuron protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100181024
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100181024
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
SspH
Tudor_3
DUF4881
Motif
Other DBs
NCBI-GeneID:
100181024
NCBI-ProteinID:
XP_002132001
Ensembl:
ENSCING00000014454
LinkDB
All DBs
Position
14:complement(2881773..2883630)
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AA seq
269 aa
AA seq
DB search
MSRKTSETVFRHSKATPDECGNVAWEDDALIKAYDTAVSNLQNFDLRTSPYQSSPPYDAS
ATVSNETGYVVWSRTPKVEVQHYADDIKQNEEYVEENDETWSAGDECMAYFYEDGLYYPA
VIQSVDYDDGTATVEYTDYNGGPEAVQLEDIHPRRLWNLSEVESNLSETTQSCSSSVANN
ADDERQKKENKPRLKSSHHNHKQFIPKPFNLMPPSPWMLPPDLNTTTNDVNSLSKDALSN
MFASWYMAGYQTGFHRGLASSCCKNNCKK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaaagacgagtgaaaccgtgttcaggcacagtaaagctacgccagatgagtgt
ggaaacgtagcgtgggaggacgatgcattaattaaggcgtatgatacggcggtatcaaat
ctacagaatttcgacttacgtacaagtccttatcagtcttccccaccgtacgatgcctca
gctaccgtgtctaacgaaactggttacgttgtttggagcagaacaccaaaagtagaggta
cagcattatgccgatgatattaaacaaaatgaagaatatgtcgaagaaaatgatgaaaca
tggtccgctggtgacgaatgcatggcatatttctatgaggatggactgtactaccctgct
gtcatacaatctgttgattatgatgacggaacagctactgtggaatataccgactacaac
gggggtcctgaggctgtacagttagaagacatacatccgcgccggctatggaatctctca
gaagttgaatcaaatttaagcgaaacaacgcaatcatgttcgagctctgtagctaataat
gctgatgatgagcggcagaaaaaagaaaataaacctcgtttaaaatcttcacatcataac
cataaacaattcattccgaaaccttttaatctaatgccgccgtctccatggatgttaccg
ccggatttaaatacgacaacgaatgatgttaacagcttatcaaaagacgcactttcgaat
atgttcgccagttggtatatggcagggtatcagactggttttcatagaggtctagcgtct
tcttgttgcaaaaataattgcaaaaaatga
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