Ciona intestinalis (yellow sea squirt): 100181072
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Entry
100181072 CDS
T01056
Name
(RefSeq) microtubule-associated protein RP/EB family member 1 isoform X3
KO
K10436
microtubule-associated protein, RP/EB family
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100181072
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100181072
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100181072
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
100181072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EB1
CH
ATG16
HOOK_N_NuMA
HIP1_clath_bdg
Phage_HK97_TLTM
Motif
Other DBs
NCBI-GeneID:
100181072
NCBI-ProteinID:
XP_002127374
Ensembl:
ENSCING00000008574
LinkDB
All DBs
Position
7:5997449..6003768
Genome browser
AA seq
312 aa
AA seq
DB search
MAAVNVFSTSMTTGNLSRQELVAWVNDSLELNISKIEHLCTGAVYCQFMNMLFGNKMHMK
KVKWGSKLEHEYIANFKLLQDCFLKTGVDKVVPIEKLVKGRFQDNFEFVQWFKKFFDANY
QGQDYDAKYMRGGAGLAVSGGAKSQFKPRVETKRTAAPNISVKPVKHDSTGSSGAKPSVS
DIETNGHNSESDITENPRSSASSRTTVAPQRIPSASSAATNQELSALRLELEEQKEQNRE
FQSSVEALEKERDFYFGKLRDIEMICQEVEQQEEMGEDVKLPFNKITTVLYATEEGFEAP
EDDLDGNPEDEY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtgaatgtgttttcgacgtcaatgacgacgggtaacttaagtcgacaggaa
cttgtggcttgggtgaatgacagcttggagttgaatatttcgaagattgaacacctttgt
acaggagctgtgtattgccaattcatgaacatgctgtttggaaacaagatgcatatgaag
aaagttaagtggggatccaaacttgaacacgaatacatcgctaactttaaacttctacaa
gattgtttcctcaagaccggagttgataaagttgtccccattgaaaagttggtgaaagga
agattccaggataattttgaattcgttcaatggtttaaaaaattctttgatgcaaattat
cagggccaggattatgatgcgaaatacatgcgtggtggagcggggttggctgttagtgga
ggagctaaatctcagtttaaaccacgtgtggaaactaaacgaaccgcagctccaaatatc
tcagtaaaaccagtgaagcatgactcgacggggagcagtggtgccaaaccaagtgtatcg
gacatagaaactaacggtcacaattctgaatcggacatcactgaaaacccacgctcttca
gcatcttcacgaacgaccgtcgcgcctcaacgaatcccttctgcttcatcggccgcaacc
aatcaggagctttcagcgctccgtctagaacttgaggaacaaaaagaacagaaccgtgag
ttccagtcatcagtggaagcactggagaaagagcgagatttttacttcggaaaactccgc
gatattgagatgatatgtcaggaggttgaacagcaggaggagatgggcgaagatgtgaaa
ctaccgttcaataaaatcactactgtgttatacgctactgaggaaggtttcgaggccccc
gaggatgatttggacggcaaccctgaagacgaatattga
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