Ciona intestinalis (yellow sea squirt): 100181141
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Entry
100181141 CDS
T01056
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00280
Valine, leucine and isoleucine degradation
cin01100
Metabolic pathways
Module
cin_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100181141
Enzymes [BR:
cin01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
100181141
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GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-GeneID:
100181141
NCBI-ProteinID:
XP_002122002
Ensembl:
ENSCING00000009293
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Position
5:2943443..2948592
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AA seq
572 aa
AA seq
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MAALKASGFILKSFSLNRHVIRLRNIYTTPAACRDWVIPIGTEQDVKSDSYKKNYDDMSK
LVGELRNKTEKISLGGNDKSRERHTSKGKLLVRDRIKLLTDPGSAFLEFSQLAGYDLYGK
EEVPAGGIITGIGKIAGTECMIVANDATVKGGSYYPITVQKHLRAQAIARENNLTCVYLV
DSGGANLPRQADVFPDRDHFGRIFYNQATMSAAGMSQIAVVMGSCTAGGAYVPAMSDESI
IVHNQGTIFLGGPPLVRAATGEVVTVEELGGADLHCKTSGVTDHYANDDPHALHIARSIV
KNLNLKKNPDIVIEKPVDPLFDSKELYGIVGTDLKKQYDCREVIARIVDGSRFDEFKKMY
GDTLVCGFSRIFGMPVGIIANNGVLFSESALKGTHFIELCCQRKIPLLFLQNITGFMVGR
AAEAGGIAKDGAKMVTAVACAQVPKITVLIGGSYGAGNYGMCGRSYNPRFLYMWPNSRIS
VMGGEQAATVLATITKDQREREGKEFTKDEEDQLKNPIIARFEKEGNPYYASARLWDDGV
IDPADTRTVVGLSLSATLNAPIPRTKFGVFRM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcagcactaaaagcaagcggtttcattctaaagtcatttagcctcaacaggcatgtt
ataagactccgaaatatttacaccacccctgcagcatgtcgagactgggtaatacctatc
ggaacagaacaagatgtaaaatcagattcttacaagaaaaactacgatgacatgtcaaaa
cttgttggtgaacttcggaacaaaactgagaaaatttccttagggggtaacgataaatca
agagaaaggcacacatccaaggggaaattattagttcgagaccgaattaaattgttaaca
gatccggggtcagctttcctggagttttcacagcttgctgggtatgatttgtatggaaag
gaagaagtaccggctggtggtatcattactgggattggaaaaattgctggaacagagtgc
atgatagtagcgaatgacgcaacggtaaaaggtggatcatattatccaatcacagtccaa
aagcatcttcgtgcacaagcgatcgcgagagaaaacaacctcacttgtgtctacctggtt
gactccggaggagcaaatcttccgagacaagcggatgtcttcccggatcgagatcacttt
gggaggattttttataaccaagcgaccatgtctgctgctggaatgtcccagatagctgta
gtgatgggttcatgcactgcaggtggagcttatgtaccagctatgtcagatgaaagtatc
atcgtgcataaccaaggaactattttcttgggtggacccccacttgttagagctgcaact
ggtgaagtagtaacagtggaggaattaggaggcgctgacttacattgtaaaacatcagga
gtaaccgaccactacgccaatgatgatcctcatgctttgcacatagcaagatctattgtg
aaaaatctaaacttaaaaaagaatccggatattgtgattgaaaaaccagtggatccttta
tttgacagtaaagagttatacggtattgttggaacagatttgaaaaaacaatatgattgt
cgtgaagttatagctcgtatagtggatggtagtagattcgatgagtttaaaaagatgtac
ggagacacccttgtatgcggcttctctcgaatattcggaatgcctgttggaatcatcgca
aataacggggtgttgttctcagagtctgcactcaaaggaactcatttcattgaactttgt
tgccagcgcaagattcctctgcttttcctacaaaatataacaggtttcatggttggtcgc
gctgctgaagctggtggaattgccaaggatggggcgaagatggtcacagcagttgcttgc
gcacaagttcccaagataactgtgctaataggtggttcatatggtgcagggaattatggg
atgtgtgggaggtcgtataacccaaggttcttgtacatgtggccgaactctcgtatctca
gtgatgggaggagaacaagcagccacagtgctcgccaccatcaccaaggatcagagggag
agggagggaaaggagttcacgaaagatgaggaagatcaattaaagaatcctattattgca
aggtttgagaaagaaggtaacccatactacgcgagtgccaggttatgggacgacggtgtg
attgaccctgctgacacccgtacagtcgtagggctaagtttaagtgctacgttaaacgca
cctattcccagaacaaaattcggcgttttcagaatgtag
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